Geelhoed Jeanine S, Sorokin Dimitry Y, Epping Eric, Tourova Tatjana P, Banciu Horia L, Muyzer Gerard, Stams Alfons J M, van Loosdrecht Mark C M
Department of Biotechnology, Environmental Biotechnology, Delft University of Technology, Delft, The Netherlands.
FEMS Microbiol Ecol. 2009 Oct;70(1):54-65. doi: 10.1111/j.1574-6941.2009.00739.x. Epub 2009 Jul 1.
The oxic-anoxic transition zone (OATZ) of freshwater sediments, where opposing gradients exist of reduced iron and sulfide with oxygen, creates a suitable environment for microorganisms that derive energy from the oxidation of iron or sulfide. Gradient microcosms incubated with freshwater sediment showed rapid microbial turnover of sulfide and oxygen compared with sterile systems. Microcosms with FeS as a substrate also showed growth at the OATZ and subsequent dilution series resulted in the isolation of three novel strains, of which strain J10 grows chemolithoautotrophically with reduced sulfur compounds under microaerobic conditions. All three strains are motile spirilla with bipolar flagella, related to the genera Magnetospirillum and Dechlorospirillum within the Alphaproteobacteria. Strain J10 is closely related to Magnetospirillum gryphiswaldense and is the first strain in this genus found to be capable of autotrophic growth. Thiosulfate was oxidized completely to sulfate, with a yield of 4 g protein mol(-1) thiosulfate, and autotrophic growth was evidenced by incorporation of (13)C derived from bicarbonate into biomass. A putative gene encoding ribulose 1,5-bisphosphate carboxylase/oxygenase type II was identified in strain J10, suggesting that the Calvin-Benson-Bassham cycle is used for autotrophic growth. Analogous genes are also present in other magnetospirilla, and in the autotrophically growing alphaproteobacterium magnetic vibrio MV-1.
淡水沉积物的好氧-缺氧过渡区(OATZ)存在着还原态铁和硫化物与氧气的相反梯度,为从铁或硫化物氧化中获取能量的微生物创造了适宜环境。与无菌系统相比,用淡水沉积物培养的梯度微宇宙显示出硫化物和氧气的快速微生物周转。以FeS为底物的微宇宙在OATZ处也显示出生长,随后的稀释系列导致分离出三株新菌株,其中J10菌株在微需氧条件下利用还原态硫化合物进行化能自养生长。所有三株菌株均为具双极鞭毛的运动螺旋菌,与α-变形菌纲中的嗜磁螺菌属和脱氯螺菌属相关。J10菌株与格里斯瓦尔德嗜磁螺菌密切相关,是该属中首个被发现能够自养生长的菌株。硫代硫酸盐被完全氧化为硫酸盐,硫代硫酸盐的蛋白质产量为4 g mol(-1),并且通过将源自碳酸氢盐的(13)C掺入生物量证明了自养生长。在J10菌株中鉴定出一个推定的编码II型核酮糖-1,5-二磷酸羧化酶/加氧酶的基因,表明卡尔文-本森-巴斯姆循环用于自养生长。类似基因也存在于其他嗜磁螺菌以及自养生长的α-变形菌磁弧菌MV-1中。