Osbourn Anne E, Field Ben
Department of Metabolic Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
Cell Mol Life Sci. 2009 Dec;66(23):3755-75. doi: 10.1007/s00018-009-0114-3. Epub 2009 Aug 7.
Operons (clusters of co-regulated genes with related functions) are common features of bacterial genomes. More recently, functional gene clustering has been reported in eukaryotes, from yeasts to filamentous fungi, plants, and animals. Gene clusters can consist of paralogous genes that have most likely arisen by gene duplication. However, there are now many examples of eukaryotic gene clusters that contain functionally related but non-homologous genes and that represent functional gene organizations with operon-like features (physical clustering and co-regulation). These include gene clusters for use of different carbon and nitrogen sources in yeasts, for production of antibiotics, toxins, and virulence determinants in filamentous fungi, for production of defense compounds in plants, and for innate and adaptive immunity in animals (the major histocompatibility locus). The aim of this article is to review features of functional gene clusters in prokaryotes and eukaryotes and the significance of clustering for effective function.
操纵子(具有相关功能的共调控基因簇)是细菌基因组的常见特征。最近,在从酵母到丝状真菌、植物和动物的真核生物中也报道了功能基因簇。基因簇可由很可能通过基因复制产生的旁系同源基因组成。然而,现在有许多真核生物基因簇的例子,它们包含功能相关但非同源的基因,代表具有操纵子样特征(物理聚类和共调控)的功能基因组织。这些包括酵母中用于利用不同碳源和氮源的基因簇、丝状真菌中用于产生抗生素、毒素和毒力决定因素的基因簇、植物中用于产生防御化合物的基因簇以及动物中用于先天免疫和适应性免疫的基因簇(主要组织相容性位点)。本文的目的是综述原核生物和真核生物中功能基因簇的特征以及聚类对于有效功能的意义。