• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

结合钾离子和哇巴因的钠钾泵(Na⁺,K⁺-ATP酶)的晶体结构。

Crystal structure of the sodium-potassium pump (Na+,K+-ATPase) with bound potassium and ouabain.

作者信息

Ogawa Haruo, Shinoda Takehiro, Cornelius Flemming, Toyoshima Chikashi

机构信息

Institute of Molecular and Cellular Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo 113-0032, Japan.

出版信息

Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13742-7. doi: 10.1073/pnas.0907054106. Epub 2009 Aug 3.

DOI:10.1073/pnas.0907054106
PMID:19666591
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2728964/
Abstract

The sodium-potassium pump (Na(+),K(+)-ATPase) is responsible for establishing Na(+) and K(+) concentration gradients across the plasma membrane and therefore plays an essential role in, for instance, generating action potentials. Cardiac glycosides, prescribed for congestive heart failure for more than 2 centuries, are efficient inhibitors of this ATPase. Here we describe a crystal structure of Na(+),K(+)-ATPase with bound ouabain, a representative cardiac glycoside, at 2.8 A resolution in a state analogous to E2.2K(+).Pi. Ouabain is deeply inserted into the transmembrane domain with the lactone ring very close to the bound K(+), in marked contrast to previous models. Due to antagonism between ouabain and K(+), the structure represents a low-affinity ouabain-bound state. Yet, most of the mutagenesis data obtained with the high-affinity state are readily explained by the present crystal structure, indicating that the binding site for ouabain is essentially the same. According to a homology model for the high affinity state, it is a closure of the binding cavity that confers a high affinity.

摘要

钠钾泵(Na⁺,K⁺-ATP酶)负责在质膜上建立Na⁺和K⁺浓度梯度,因此在诸如产生动作电位等过程中发挥着至关重要的作用。两个多世纪以来一直用于治疗充血性心力衰竭的强心苷是这种ATP酶的有效抑制剂。在此,我们描述了与代表性强心苷哇巴因结合的Na⁺,K⁺-ATP酶的晶体结构,其分辨率为2.8 Å,处于类似于E2·2K⁺·Pi的状态。与之前的模型形成鲜明对比的是,哇巴因深深插入跨膜结构域,内酯环非常靠近结合的K⁺。由于哇巴因和K⁺之间的拮抗作用,该结构代表了一种低亲和力的哇巴因结合状态。然而,目前的晶体结构很容易解释大多数在高亲和力状态下获得的诱变数据,这表明哇巴因的结合位点基本相同。根据高亲和力状态的同源模型,结合腔的闭合赋予了高亲和力。

相似文献

1
Crystal structure of the sodium-potassium pump (Na+,K+-ATPase) with bound potassium and ouabain.结合钾离子和哇巴因的钠钾泵(Na⁺,K⁺-ATP酶)的晶体结构。
Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13742-7. doi: 10.1073/pnas.0907054106. Epub 2009 Aug 3.
2
Reconstruction of the complete ouabain-binding pocket of Na,K-ATPase in gastric H,K-ATPase by substitution of only seven amino acids.仅通过替换七个氨基酸,在胃H⁺,K⁺ -ATP酶中重建钠钾ATP酶的完整哇巴因结合口袋。
J Biol Chem. 2005 Sep 16;280(37):32349-55. doi: 10.1074/jbc.M505168200. Epub 2005 Jul 28.
3
Crystal structure of the high-affinity Na+K+-ATPase-ouabain complex with Mg2+ bound in the cation binding site.高亲和力 Na+-K+-ATPase-哇巴因复合物与结合在阳离子结合位点的 Mg2+的晶体结构。
Proc Natl Acad Sci U S A. 2013 Jul 2;110(27):10958-63. doi: 10.1073/pnas.1222308110. Epub 2013 Jun 17.
4
Interaction between cardiotonic steroids and Na,K-ATPase. Effects of pH and ouabain-induced changes in enzyme conformation.强心甾类与钠钾ATP酶之间的相互作用。pH值及哇巴因诱导的酶构象变化的影响。
Biochemistry. 2009 Oct 27;48(42):10056-65. doi: 10.1021/bi901212r.
5
Metal fluoride complexes of Na,K-ATPase: characterization of fluoride-stabilized phosphoenzyme analogues and their interaction with cardiotonic steroids.金属氟化物配合物的 Na,K-ATPase:氟化物稳定的磷酸酶类似物的特性及其与强心甾体的相互作用。
J Biol Chem. 2011 Aug 26;286(34):29882-92. doi: 10.1074/jbc.M111.259663. Epub 2011 Jun 27.
6
A structural rearrangement of the Na+/K+-ATPase traps ouabain within the external ion permeation pathway.钠钾ATP酶的结构重排会将哇巴因截留在外部离子渗透途径中。
J Mol Biol. 2015 Mar 27;427(6 Pt B):1335-1344. doi: 10.1016/j.jmb.2015.01.011. Epub 2015 Jan 28.
7
Ouabain interactions with the H5-H6 hairpin of the Na,K-ATPase reveal a possible inhibition mechanism via the cation binding domain.哇巴因与钠钾ATP酶H5-H6发夹结构的相互作用揭示了一种通过阳离子结合域的可能抑制机制。
J Biol Chem. 1996 Jun 14;271(24):14176-82. doi: 10.1074/jbc.271.24.14176.
8
Crystal structure of the sodium-potassium pump at 2.4 A resolution.钠钾泵在2.4埃分辨率下的晶体结构。
Nature. 2009 May 21;459(7245):446-50. doi: 10.1038/nature07939.
9
Spin-labeled derivatives of cardiotonic steroids as tools for characterization of the extracellular entrance to the binding site on Na ,K -ATPase.作为鉴定 Na+,K+-ATP 酶结合部位细胞外入口的工具的强心甾类化合物的自旋标记衍生物。
FEBS J. 2018 Jun;285(12):2292-2305. doi: 10.1111/febs.14480. Epub 2018 May 8.
10
Structural insights into the high affinity binding of cardiotonic steroids to the Na+,K+-ATPase.强心甾体与 Na+,K+-ATP 酶高亲和力结合的结构见解。
J Struct Biol. 2011 May;174(2):296-306. doi: 10.1016/j.jsb.2010.12.004. Epub 2010 Dec 21.

引用本文的文献

1
Versatile Butenolide Syntheses via a Structure-Oriented C-H Activation Reaction.通过结构导向的C-H活化反应实现多功能丁烯内酯的合成。
J Am Chem Soc. 2025 Jul 23;147(29):26019-26028. doi: 10.1021/jacs.5c09040. Epub 2025 Jul 3.
2
The large milkweed bugs' Na,K-ATPase β-subunits colocalize with septate junction proteins in a tissue-specific manner.大斑蝶角蛉的钠钾ATP酶β亚基以组织特异性方式与分隔连接蛋白共定位。
Cell Tissue Res. 2025 Mar 26. doi: 10.1007/s00441-025-03965-3.
3
Metabolic Energy is Stored in a Homeostatic Trans-Membrane Water Barochemical Gradient.代谢能量存储于稳态跨膜水生物化学梯度中。
J Membr Biol. 2025 Apr;258(2):135-160. doi: 10.1007/s00232-024-00332-1. Epub 2025 Feb 26.
4
Target Identification of Marine Natural Product Odoamide:Odoamide Induces Apoptotic Cell Death by Targeting ATPase Na/K Transporting Subunit Alpha 1 (ATP1A1).海洋天然产物奥多酰胺的靶点鉴定:奥多酰胺通过靶向ATP酶钠/钾转运亚基α1(ATP1A1)诱导细胞凋亡性死亡。
Chembiochem. 2025 Mar 15;26(6):e202400762. doi: 10.1002/cbic.202400762. Epub 2025 Jan 24.
5
Beta vulgaris L. beetroot protects against iron-induced liver injury by restoring antioxidant pathways and regulating cellular functions.食用甜菜根可通过恢复抗氧化途径和调节细胞功能来预防铁诱导的肝损伤。
Sci Rep. 2024 Oct 24;14(1):25205. doi: 10.1038/s41598-024-77503-6.
6
Synthetic Naphthoquinone Inhibits Herpes Simplex Virus Type-1 Replication Targeting Na, K ATPase.合成萘醌通过靶向钠钾ATP酶抑制单纯疱疹病毒1型复制
ACS Omega. 2024 Aug 16;9(34):36835-36846. doi: 10.1021/acsomega.4c05904. eCollection 2024 Aug 27.
7
"Cardiac glycosides"-quo vaditis?-past, present, and future?“强心苷”——你们了解多少?——过去、现在和未来?
Naunyn Schmiedebergs Arch Pharmacol. 2024 Dec;397(12):9521-9531. doi: 10.1007/s00210-024-03285-3. Epub 2024 Jul 15.
8
Na/K-ATPase: More than an Electrogenic Pump.钠钾 ATP 酶:不仅仅是一种生电性泵。
Int J Mol Sci. 2024 Jun 1;25(11):6122. doi: 10.3390/ijms25116122.
9
Fungal Plasma Membrane H-ATPase: Structure, Mechanism, and Drug Discovery.真菌质膜H-ATP酶:结构、机制与药物发现
J Fungi (Basel). 2024 Apr 8;10(4):273. doi: 10.3390/jof10040273.
10
A Futile Cycle?: Tissue Homeostatic Trans-Membrane Water Co-Transport: Kinetics, Thermodynamics, Metabolic Consequences.一个无效循环?:组织稳态跨膜水协同转运:动力学、热力学及代谢后果
bioRxiv. 2024 Apr 26:2024.04.17.589812. doi: 10.1101/2024.04.17.589812.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Crystal structure of the sodium-potassium pump at 2.4 A resolution.钠钾泵在2.4埃分辨率下的晶体结构。
Nature. 2009 May 21;459(7245):446-50. doi: 10.1038/nature07939.
3
Novel therapeutic applications of cardiac glycosides.强心苷的新型治疗应用。
Nat Rev Drug Discov. 2008 Nov;7(11):926-35. doi: 10.1038/nrd2682. Epub 2008 Oct 24.
4
How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump.天冬氨酰磷酸的加工过程是如何与钙泵中离子通道的管腔门控相偶联的。
Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19831-6. doi: 10.1073/pnas.0709978104. Epub 2007 Dec 5.
5
Reconstruction of the complete ouabain-binding pocket of Na,K-ATPase in gastric H,K-ATPase by substitution of only seven amino acids.仅通过替换七个氨基酸,在胃H⁺,K⁺ -ATP酶中重建钠钾ATP酶的完整哇巴因结合口袋。
J Biol Chem. 2005 Sep 16;280(37):32349-55. doi: 10.1074/jbc.M505168200. Epub 2005 Jul 28.
6
Interactions between cardiac glycosides and sodium/potassium-ATPase: three-dimensional structure-activity relationship models for ligand binding to the E2-Pi form of the enzyme versus activity inhibition.强心苷与钠/钾-ATP酶之间的相互作用:配体与该酶E2-Pi形式结合及活性抑制的三维构效关系模型
Biochemistry. 2005 Jan 18;44(2):498-510. doi: 10.1021/bi048680w.
7
Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues.钙泵晶体结构中与磷酸盐类似物相关的腔内门控机制得以揭示。
Nature. 2004 Nov 18;432(7015):361-8. doi: 10.1038/nature02981. Epub 2004 Sep 26.
8
Specific structural requirements for the inhibitory effect of thapsigargin on the Ca2+ ATPase SERCA.毒胡萝卜素对Ca2+ ATP酶SERCA抑制作用的特定结构要求。
J Biol Chem. 2004 Apr 23;279(17):17973-9. doi: 10.1074/jbc.M313263200. Epub 2004 Feb 17.
9
New molecular determinants controlling the accessibility of ouabain to its binding site in human Na,K-ATPase alpha isoforms.控制哇巴因与人钠钾ATP酶α亚型结合位点可及性的新分子决定因素。
Mol Pharmacol. 2004 Feb;65(2):335-41. doi: 10.1124/mol.65.2.335.
10
Phe783, Thr797, and Asp804 in transmembrane hairpin M5-M6 of Na+,K+-ATPase play a key role in ouabain binding.钠钾ATP酶跨膜发夹结构M5-M6中的苯丙氨酸783、苏氨酸797和天冬氨酸804在哇巴因结合中起关键作用。
J Biol Chem. 2003 Nov 21;278(47):47240-4. doi: 10.1074/jbc.M308833200. Epub 2003 Sep 12.