Brown Jeffrey W, Vardar-Ulu Didem, McKnight C James
Department of Physiology and Biophysics, Boston University School of Medicine, 700 Albany Street, Boston, MA 02118, USA.
J Mol Biol. 2009 Oct 30;393(3):608-18. doi: 10.1016/j.jmb.2009.08.018. Epub 2009 Aug 14.
Villin-type headpiece domains are compact motifs that have been used extensively as model systems for protein folding. Although the majority of headpiece domains bind actin, there are some that lack this activity. Here, we present the first NMR solution structure and (15)N-relaxation analysis of a villin-type headpiece domain natively devoid of F-actin binding activity, that of supervillin headpiece (SVHP). The structure was found to be similar to that of other headpiece domains that bind F-actin. Our NMR analysis demonstrates that SVHP lacks a conformationally flexible region (V-loop) present in all other villin-type headpiece domains and which is essential to the phosphoryl regulation of dematin headpiece. In comparing the electrostatic surface potential map of SVHP to that of other villin-type headpiece domains with significant affinity for F-actin, we identified a positive surface potential conserved among headpiece domains that bind F-actin but absent from SVHP. A single point mutation (L38K) in SVHP, which creates a similar positive surface potential, endowed SVHP with specific affinity for F-actin that is within an order of magnitude of the tightest binding headpiece domains. We propose that this effect is likely conferred by a specific buried salt bridge between headpiece and actin. As no high-resolution structural information exists for the villin-type headpiece F-actin complex, our results demonstrate that through positive mutagenesis, it is possible to design binding activity into homologous proteins without structural information of the counterpart's binding surface.
绒毛蛋白型头部结构域是紧凑的基序,已被广泛用作蛋白质折叠的模型系统。尽管大多数头部结构域与肌动蛋白结合,但也有一些缺乏这种活性。在这里,我们展示了首个对天然缺乏F-肌动蛋白结合活性的绒毛蛋白型头部结构域—— supervillin头部结构域(SVHP)的核磁共振溶液结构和(15)N弛豫分析。发现该结构与其他结合F-肌动蛋白的头部结构域相似。我们的核磁共振分析表明,SVHP缺乏所有其他绒毛蛋白型头部结构域中存在的构象灵活区域(V环),而该区域对去膜蛋白头部结构域的磷酸化调节至关重要。在将SVHP的静电表面电势图与其他对F-肌动蛋白具有显著亲和力的绒毛蛋白型头部结构域的电势图进行比较时,我们确定了在结合F-肌动蛋白的头部结构域中保守但在SVHP中不存在的正表面电势。SVHP中的单点突变(L38K)产生了类似的正表面电势,赋予了SVHP对F-肌动蛋白的特异性亲和力,其亲和力与结合最紧密的头部结构域相差一个数量级。我们认为这种效应可能是由头部结构域与肌动蛋白之间特定的埋藏盐桥赋予的。由于绒毛蛋白型头部结构域与F-肌动蛋白复合物没有高分辨率的结构信息,我们的结果表明,通过正向诱变,可以在没有对应物结合表面结构信息的情况下,设计同源蛋白的结合活性。