Miears Heather L, Gruber David R, Horvath Nicholas M, Antos John M, Young Jeff, Sigurjonsson Johann P, Klem Maya L, Rosenkranz Erin A, Okon Mark, McKnight C James, Vugmeyster Liliya, Smirnov Serge L
Department of Chemistry , Western Washington University , 516 High Street , Bellingham , Washington 98225-9150 , United States.
Department of Biology , Western Washington University , 516 High Street , Bellingham , Washington 98225-9160 , United States.
Biochemistry. 2018 Mar 20;57(11):1690-1701. doi: 10.1021/acs.biochem.7b00856. Epub 2018 Feb 21.
Plants utilize multiple isoforms of villin, an F-actin regulating protein with an N-terminal gelsolin-like core and a distinct C-terminal headpiece domain. Unlike their vertebrate homologues, plant villins have a much longer linker polypeptide connecting the core and headpiece. Moreover, the linker-headpiece connection region in plant villins lacks sequence homology to the vertebrate villin sequences. It is unknown to what extent the plant villin headpiece structure and function resemble those of the well-studied vertebrate counterparts. Here we present the first solution NMR structure and backbone dynamics characterization of a headpiece from plants, villin isoform 4 from Arabidopsis thaliana. The villin 4 headpiece is a 63-residue domain (V4HP63) that adopts a typical headpiece fold with an aromatics core and a tryptophan-centered hydrophobic cap within its C-terminal subdomain. However, V4HP63 has a distinct N-terminal subdomain fold as well as a novel, high mobility loop due to the insertion of serine residue in the canonical sequence that follows the variable length loop in headpiece sequences. The domain binds actin filaments with micromolar affinity, like the vertebrate analogues. However, the V4HP63 surface charge pattern is novel and lacks certain features previously thought necessary for high-affinity F-actin binding. Utilizing the updated criteria for strong F-actin binding, we predict that the headpiece domains of all other villin isoforms in A. thaliana have high affinity for F-actin.
植物利用多种绒毛蛋白同工型,绒毛蛋白是一种F-肌动蛋白调节蛋白,具有N端凝溶胶蛋白样核心和独特的C端头部结构域。与它们的脊椎动物同源物不同,植物绒毛蛋白具有更长的连接多肽,连接核心和头部。此外,植物绒毛蛋白中的连接头部连接区域与脊椎动物绒毛蛋白序列缺乏序列同源性。目前尚不清楚植物绒毛蛋白头部结构和功能与经过充分研究的脊椎动物对应物的相似程度。在此,我们展示了来自植物的绒毛蛋白同工型4(拟南芥绒毛蛋白同工型4)头部的首个溶液核磁共振结构以及主链动力学特征。绒毛蛋白4头部是一个63个残基的结构域(V4HP63),其C端亚结构域采用典型的头部折叠,具有芳香族核心和以色氨酸为中心的疏水帽。然而,由于在头部序列中可变长度环之后的经典序列中插入了丝氨酸残基,V4HP63具有独特的N端亚结构域折叠以及一个新的高迁移率环。该结构域像脊椎动物类似物一样,以微摩尔亲和力结合肌动蛋白丝。然而,V4HP63的表面电荷模式是新颖的,并且缺乏以前认为对于高亲和力F-肌动蛋白结合所必需的某些特征。利用更新后的强F-肌动蛋白结合标准,我们预测拟南芥中所有其他绒毛蛋白同工型的头部结构域对F-肌动蛋白具有高亲和力。