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基于活性的探针用于监测脯氨酸蛋白酶活性。

Activity-based probes for monitoring postproline protease activity.

机构信息

Institut de Recerca Biomèdica, 08028 Barcelona, Spain.

出版信息

Chembiochem. 2009 Sep 21;10(14):2361-6. doi: 10.1002/cbic.200900244.

DOI:10.1002/cbic.200900244
PMID:19688784
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2847404/
Abstract

Postproline proteases constitute a subset of serine proteases involved in the regulation of many signaling events and are emerging as promising therapeutic targets for prevalent diseases, such as diabetes and cancer. Therefore, monitoring their activity in different tissues and diverse physiological states would certainly facilitate the elucidation of their physiological role and the establishment of new therapeutic targets. Here, we have synthesized a dipeptidyl phosphonate activity-based probe that has proved to be highly selective for a specific postproline protease, prolyl oligopeptidase (POP). Its high sensitivity allows the detection of the endogenous activity of POP both by in-gel analysis and mass spectrometry. The evidence provided by mass spectrometry for the high selectivity of the synthesized probe opens the possibility of using dipeptidyl phosphonates not only for activity-based profiling (ABP), but also for other ABP applications like substrate-based protease identification.

摘要

脯氨酰肽酶构成了丝氨酸蛋白酶的一个亚类,参与许多信号事件的调节,并且作为治疗常见疾病(如糖尿病和癌症)的有前途的靶点而出现。因此,监测它们在不同组织和不同生理状态下的活性肯定会有助于阐明它们的生理作用,并建立新的治疗靶点。在这里,我们合成了一种二肽基膦酸活性探针,该探针已被证明对特定的脯氨酰肽酶,脯氨酰寡肽酶(POP)具有高度选择性。其高灵敏度允许通过凝胶分析和质谱法检测内源性 POP 活性。质谱法提供的证据表明,所合成探针具有高选择性,这为使用二肽基膦酸盐不仅进行基于活性的蛋白质组学分析(ABP),而且为其他基于底物的蛋白酶鉴定等 ABP 应用开辟了可能性。

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Activity-based probes for monitoring postproline protease activity.基于活性的探针用于监测脯氨酸蛋白酶活性。
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2
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The noncatalytic beta-propeller domain of prolyl oligopeptidase enhances the catalytic capability of the peptidase domain.脯氨酰寡肽酶的非催化β-螺旋桨结构域增强了肽酶结构域的催化能力。
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Peptide length and leaving-group sterics influence potency of peptide phosphonate protease inhibitors.肽的长度和离去基团的空间位阻影响肽膦酸酯蛋白酶抑制剂的效力。
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本文引用的文献

1
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.一种将肽的串联质谱数据与蛋白质数据库中氨基酸序列相关联的方法。
J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. doi: 10.1016/1044-0305(94)80016-2.
2
Influence of proline on the thermostability of the active site and membrane arrangement of transmembrane proteins.脯氨酸对跨膜蛋白活性位点热稳定性及膜排列的影响。
Biophys J. 2008 Nov 1;95(9):4384-95. doi: 10.1529/biophysj.108.136747. Epub 2008 Jul 25.
3
Activation of the endocannabinoid system by organophosphorus nerve agents.有机磷神经毒剂对内源性大麻素系统的激活作用。
Nat Chem Biol. 2008 Jun;4(6):373-8. doi: 10.1038/nchembio.86. Epub 2008 Apr 27.
4
The importance of proline residues in the structure, stability and susceptibility to proteolytic degradation of collagens.脯氨酸残基在胶原蛋白的结构、稳定性及对蛋白水解降解的敏感性方面的重要性。
Amino Acids. 2008 Nov;35(4):703-10. doi: 10.1007/s00726-008-0073-2. Epub 2008 Apr 23.
5
Proline-rich, amphipathic cell-penetrating peptides.富含脯氨酸的两亲性细胞穿透肽。
Adv Drug Deliv Rev. 2008 Mar 1;60(4-5):473-84. doi: 10.1016/j.addr.2007.09.012. Epub 2007 Nov 17.
6
Prolyl cis-trans isomerization as a molecular timer.脯氨酰顺反异构化作为一种分子计时器。
Nat Chem Biol. 2007 Oct;3(10):619-29. doi: 10.1038/nchembio.2007.35.
7
all-D proline-rich cell-penetrating peptides: a preliminary in vivo internalization study.全D型富含脯氨酸的细胞穿透肽:一项初步的体内内化研究。
Biochem Soc Trans. 2007 Aug;35(Pt 4):794-6. doi: 10.1042/BST0350794.
8
Proline-rich polypeptides in Alzheimer's disease and neurodegenerative disorders -- therapeutic potential or a mirage?阿尔茨海默病和神经退行性疾病中富含脯氨酸的多肽——治疗潜力还是海市蜃楼?
Prog Neuropsychopharmacol Biol Psychiatry. 2007 Oct 1;31(7):1347-55. doi: 10.1016/j.pnpbp.2007.06.005. Epub 2007 Jun 21.
9
Identification by 19F NMR of traditional Chinese medicinal plants possessing prolyl oligopeptidase inhibitory activity.通过19F核磁共振鉴定具有脯氨酰寡肽酶抑制活性的传统中药植物。
Chembiochem. 2006 May;7(5):827-33. doi: 10.1002/cbic.200500424.
10
Development of activity-based probes for trypsin-family serine proteases.基于活性的胰蛋白酶家族丝氨酸蛋白酶探针的开发。
Bioorg Med Chem Lett. 2006 Jun 1;16(11):2882-5. doi: 10.1016/j.bmcl.2006.03.012. Epub 2006 Mar 22.