Newstead Simon, Fowler Philip W, Bilton Paul, Carpenter Elisabeth P, Sadler Peter J, Campopiano Dominic J, Sansom Mark S P, Iwata So
Division of Molecular Biosciences, Membrane Protein Crystallography Group, Imperial College London, London, UK.
Structure. 2009 Sep 9;17(9):1213-22. doi: 10.1016/j.str.2009.07.009.
The mechanism by which nucleotide-binding domains (NBDs) of ABC transporters power the transport of substrates across cell membranes is currently unclear. Here we report the crystal structure of an NBD, FbpC, from the Neisseria gonorrhoeae ferric iron uptake transporter with an unusual and substantial domain swap in the C-terminal regulatory domain. This entanglement suggests that FbpC is unable to open to the same extent as the homologous protein MalK. Using molecular dynamics we demonstrate that this is not the case: both NBDs open rapidly once ATP is removed. We conclude from this result that the closed structures of FbpC and MalK have higher free energies than their respective open states. This result has important implications for our understanding of the mechanism of power generation in ABC transporters, because the unwinding of this free energy ensures that the opening of these two NBDs is also powered.
ABC转运蛋白的核苷酸结合结构域(NBDs)为底物跨细胞膜转运提供能量的机制目前尚不清楚。在此,我们报道了淋病奈瑟菌铁摄取转运蛋白的一个NBD,即FbpC的晶体结构,其C端调节结构域存在异常且大量的结构域交换。这种缠结表明FbpC无法像同源蛋白MalK那样打开到相同程度。利用分子动力学我们证明情况并非如此:一旦去除ATP,两个NBD都会迅速打开。我们从这一结果得出结论,FbpC和MalK的闭合结构比它们各自的开放状态具有更高的自由能。这一结果对于我们理解ABC转运蛋白中的能量产生机制具有重要意义,因为这种自由能的释放确保了这两个NBD的打开也是由能量驱动的。