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脊椎动物发育过程中分割时钟基因的同步振荡。

Synchronized oscillation of the segmentation clock gene in vertebrate development.

作者信息

Uriu Koichiro, Morishita Yoshihiro, Iwasa Yoh

机构信息

Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka, 812-8581, Japan.

PRESTO Japan Science and Technology Agency, 4-1-8 Honcho Kawaguchi, Saitama, 332-0012, Japan.

出版信息

J Math Biol. 2010 Aug;61(2):207-229. doi: 10.1007/s00285-009-0296-1. Epub 2009 Sep 16.

Abstract

In vertebrate somitogenesis, "segmentation clock" genes (her in zebrafish, hes in mouse, and hairy in chick) show oscillation, synchronized over nearby cells through intercellular interaction. In zebrafish, neighboring cells interact by Delta-Notch signaling to realize synchronization. Under Delta-Notch, however, a cell with a high expression of the segmentation clock gene tends to suppress its expression in adjacent cells, which might produce spatial heterogeneity instead of synchronized oscillation. Here we studied the conditions under which pre-somitic mesoderm cells show synchronized oscillation of gene expression mathematically. We adopted a model that explicitly considers the kinetics of the mRNA and proteins of the segmentation clock gene and cell-cell interaction via Delta-Notch signaling. From statistical study of a model with randomly generated parameters, we revealed how the likelihood that the system generates stable synchronized oscillation depends on the rate of each reaction in the gene-protein kinetics.

摘要

在脊椎动物体节发生过程中,“分割时钟”基因(斑马鱼中的her、小鼠中的hes以及鸡中的hairy)呈现振荡,通过细胞间相互作用在相邻细胞间实现同步。在斑马鱼中,相邻细胞通过Delta-Notch信号传导进行相互作用以实现同步。然而,在Delta-Notch信号作用下,分割时钟基因高表达的细胞倾向于抑制其在相邻细胞中的表达,这可能会产生空间异质性而非同步振荡。在此,我们从数学角度研究了体节中胚层细胞呈现基因表达同步振荡的条件。我们采用了一个明确考虑分割时钟基因的mRNA和蛋白质动力学以及通过Delta-Notch信号传导的细胞间相互作用的模型。通过对具有随机生成参数的模型进行统计研究,我们揭示了系统产生稳定同步振荡的可能性如何取决于基因-蛋白质动力学中每个反应的速率。

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