Babity J M, Starr T V, Rose A M
Department of Medical Genetics, University of British Columbia, Vancouver, Canada.
Mol Gen Genet. 1990 Jun;222(1):65-70. doi: 10.1007/BF00283024.
In most strains of Caenorhabditis elegans with a low copy number of Tc1 transposable elements, germline transposition is rare or undetectable. We have observed low-level Tc1 transposition in the genome of the C. elegans var. Bristol strain KR579 (unc-13[e51]) resulting in an increase in Tc1 copy number and subsequent mutator activity. Examination of genomic blots from KR579 and KR579-derived strains revealed that more Tc1-hybridizing bands were present than in other Bristol strains. A novel Tc1-hybridizing fragment was cloned from a KR579-derived strain. Unique sequence DNA flanking the Tc1 element identified a 1.6 kb restriction fragment length difference between the KR579 and N2 strains consistent with a Tc1 insertion at a new genomic site. The site of insertion of this Tc1 was sequenced and is similar to the published Tc1 insertion site consensus sequence. Several isolates of KR579 were established and maintained on plates for a period of 3 years in order to determine if Tc1 copy number would continue to increase. In one isolate, KR1787, a further increase in Tc1 copy number was observed. Examination of the KR1787 strain has shown that it also exhibits mutator activity as assayed by the spontaneous mutation frequency at the unc-22 (twitcher) locus. The KR579 strain differs from most low copy number strains in that it exhibits low-level transposition which has developed into mutator activity.
在大多数转座元件Tc1拷贝数较低的秀丽隐杆线虫品系中,种系转座很少见或无法检测到。我们在秀丽隐杆线虫变种布里斯托品系KR579(unc-13[e51])的基因组中观察到了低水平的Tc1转座,这导致Tc1拷贝数增加以及随后的诱变活性。对KR579及其衍生品系的基因组印迹进行检查发现,与其他布里斯托品系相比,存在更多的Tc1杂交条带。从KR579衍生品系中克隆了一个新的Tc1杂交片段。Tc1元件侧翼的独特序列DNA确定了KR579和N2品系之间存在1.6 kb的限制性片段长度差异,这与一个新基因组位点处的Tc1插入一致。对该Tc1的插入位点进行了测序,其与已发表的Tc1插入位点共有序列相似。建立了几个KR579分离株并在平板上维持了3年,以确定Tc1拷贝数是否会继续增加