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临床预测因子和算法用于嗜铬细胞瘤患者的基因诊断。

Clinical predictors and algorithm for the genetic diagnosis of pheochromocytoma patients.

机构信息

Department of Nephrology, Section of Preventive Medicine, Albert-Ludwigs-University, Hugstetter Strasse 55, Freiburg, Germany.

出版信息

Clin Cancer Res. 2009 Oct 15;15(20):6378-85. doi: 10.1158/1078-0432.CCR-09-1237. Epub 2009 Oct 13.

Abstract

PURPOSE

Six pheochromocytoma susceptibility genes causing distinct syndromes have been identified; approximately one of three of all pheochromocytoma patients carry a predisposing germline mutation. When four major genes (VHL, RET, SDHB, SDHD) are analyzed in a clinical laboratory, costs are approximately $3,400 per patient. The aim of the study is to systematically obtain a robust algorithm to identify who should be genetically tested, and to determine the order in which genes should be tested.

EXPERIMENTAL DESIGN

DNA from 989 apparently nonsyndromic patients were scanned for germline mutations in the genes VHL, RET, SDHB, SDHC, and SDHD. Clinical parameters were analyzed as potential predictors for finding mutations by multiple logistic regression, validated by bootstrapping. Cost reduction was calculated between prioritized gene testing compared with that for all genes.

RESULTS

Of 989 apparently nonsyndromic pheochromocytoma cases, 187 (19%) harbored germline mutations. Predictors for presence of mutation are age <45 years, multiple pheochromocytoma, extra-adrenal location, and previous head and neck paraganglioma. If we used the presence of any one predictor as indicative of proceeding with gene testing, then 342 (34.6%) patients would be excluded, and only 8 carriers (4.3%) would be missed. We were also able to statistically model the priority of genes to be tested given certain clinical features. E.g., for patients with prior head and neck paraganglioma, the priority would be SDHD>SDHB>RET>VHL. Using the clinical predictor algorithm to prioritize gene testing and order, a 44.7% cost reduction in diagnostic process can be achieved.

CONCLUSIONS

Clinical parameters can predict for mutation carriers and help prioritize gene testing to reduce costs in nonsyndromic pheochromocytoma presentations.

摘要

目的

已经确定了导致不同综合征的六个嗜铬细胞瘤易感性基因;大约三分之一的嗜铬细胞瘤患者携带易感性种系突变。当在临床实验室中分析四个主要基因(VHL、RET、SDHB、SDHD)时,每个患者的成本约为 3400 美元。本研究的目的是系统地获得一种强大的算法来识别应进行基因检测的患者,并确定应检测的基因顺序。

实验设计

对 989 例明显非综合征患者的 DNA 进行扫描,以检测 VHL、RET、SDHB、SDHC 和 SDHD 基因中的种系突变。通过多元逻辑回归分析临床参数作为发现突变的潜在预测因子,通过自举法进行验证。计算优先进行基因检测与所有基因检测的成本降低。

结果

在 989 例明显非综合征性嗜铬细胞瘤病例中,187 例(19%)携带种系突变。存在突变的预测因子是年龄<45 岁、多发性嗜铬细胞瘤、肾上腺外位置和既往头颈部副神经节瘤。如果我们使用任何一个预测因子的存在作为进行基因检测的指示,那么将排除 342 例(34.6%)患者,仅漏诊 8 例携带者(4.3%)。我们还能够根据特定的临床特征对要检测的基因进行优先级建模。例如,对于有头颈部副神经节瘤病史的患者,优先级为 SDHD>SDHB>RET>VHL。使用临床预测因子算法优先进行基因检测和排序,可以降低 44.7%的诊断过程成本。

结论

临床参数可以预测突变携带者,并有助于优先进行基因检测,以降低非综合征性嗜铬细胞瘤表现的成本。

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