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硫,仅次于 O、N 和 C:SH…pi 氢键。

Sulfur, not too far behind O, N, and C: SH...pi hydrogen bond.

机构信息

Department of Chemical Sciences, Tata Institute of Fundamental Research, Homi Bhabha Road, Colaba, Mumbai 400 005.

出版信息

J Phys Chem A. 2009 Nov 19;113(46):12774-82. doi: 10.1021/jp907747w.

Abstract

We report hydrogen-bonded complexes of H(2)S with indole and 3-methyl indole stabilized by the S-H...pi interaction. It is interesting to discover that although sulfur and its hydrides are known as poor hydrogen-bond donor/acceptors, sulfur is not too far behind oxygen, nitrogen, and carbon in regard to forming the pi-type hydrogen bonds. This report also extends the scope of our earlier studies from sigma-type hydrogen-bonded complexes of sulfur (O-H...S and N-H...S sigma-type hydrogen-bonded complexes) to pi-type hydrogen-bonded complexes of sulfur (S-H...pi pi-type hydrogen-bonded complexes). The experiments were carried out using the supersonic jet expansion technique, and the complexes were probed using laser-induced spectroscopy such as laser-induced fluorescence (LIF), resonant two-photon inonization (R2PI), and fluorescence dip infrared spectroscopy (FDIRS). The FDIR spectroscopy revealed that while there was no shift in the N-H stretch, the S-H stretch was red shifted by about 21 cm(-1). For the H(2)O complexes of indole and 3-methylindole, however, there was a significant red shift in the N-H stretch. These observations suggest that H(2)O forms a NH...O type complex, whereas H(2)S prefers to form a SH...pi type complex. The experimental results were complemented by ab initio calculations and energy decomposition analysis. The binding energies for both the sigma-type and pi-type hydrogen-bonded M.L complexes (M = indole and 3-methylindole; L = H(2)O and H(2)S) were calculated by extrapolating MP2 interaction energies to the complete basis set limit. The calculated M.H(2)S (sigma-type) interaction energy (2.74 kcal/mol) was considerably smaller than that of the M.H(2)S pi-type hydrogen-bonded complex (4.89 kcal/mol), which is exactly opposite of the trend found for the M.H(2)O complexes. This is consistent with the experimental observations. Comparison of the S-H...pi interaction with the other type of X-H...pi (X = C, N, and O) shows that the S-H...pi interaction is the strongest among them. In all of the pi-type HB complexes, the dispersion energy component has significant contribution to the total binding energy.

摘要

我们报告了硫化氢与吲哚和 3-甲基吲哚形成的氢键复合物,这些复合物通过 S-H…π 相互作用稳定。有趣的是,尽管硫及其氢化物通常被认为是较差的氢键供体/受体,但在形成 π 型氢键方面,硫与氧、氮和碳的差距并不大。本报告还将我们早期的研究范围从硫的 σ 型氢键复合物(O-H…S 和 N-H…S σ 型氢键复合物)扩展到硫的 π 型氢键复合物(S-H…π π 型氢键复合物)。实验采用超声速射流膨胀技术进行,使用激光诱导光谱(如激光诱导荧光(LIF)、共振双光子电离(R2PI)和荧光二红外光谱(FDIRS))探测复合物。FDIRS 光谱表明,尽管 N-H 伸缩没有移动,但 S-H 伸缩红移了约 21cm-1。然而,对于吲哚和 3-甲基吲哚的 H2O 复合物,N-H 伸缩有明显的红移。这些观察结果表明,H2O 形成 NH…O 型复合物,而 H2S 更喜欢形成 SH…π 型复合物。实验结果得到了从头算计算和能量分解分析的补充。通过外推 MP2 相互作用能至完全基组极限,计算了两种 σ 型和 π 型氢键复合物(M=吲哚和 3-甲基吲哚;L=H2O 和 H2S)的结合能。计算得到的 M.H2S(σ 型)相互作用能(2.74kcal/mol)明显小于 M.H2S π 型氢键复合物(4.89kcal/mol),这与 M.H2O 复合物的趋势完全相反。这与实验观察结果一致。将 S-H…π 相互作用与其他类型的 X-H…π(X=C、N 和 O)进行比较表明,S-H…π 相互作用是其中最强的。在所有的 π 型 HB 复合物中,色散能成分对总结合能有显著贡献。

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