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本文引用的文献

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Control of inducible gene expression by signal-dependent transcriptional elongation.通过信号依赖的转录延伸来控制可诱导基因的表达。
Cell. 2009 Jul 10;138(1):129-45. doi: 10.1016/j.cell.2009.05.047.
2
Transcription termination by nuclear RNA polymerases.细胞核RNA聚合酶介导的转录终止
Genes Dev. 2009 Jun 1;23(11):1247-69. doi: 10.1101/gad.1792809.
3
TFIIH kinase places bivalent marks on the carboxy-terminal domain of RNA polymerase II.TFIIH激酶在RNA聚合酶II的羧基末端结构域上形成双价标记。
Mol Cell. 2009 May 15;34(3):387-93. doi: 10.1016/j.molcel.2009.04.016.
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Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation.Rtr1是一种CTD磷酸酶,在从丝氨酸5磷酸化向丝氨酸2磷酸化转变的过程中调节RNA聚合酶II。
Mol Cell. 2009 Apr 24;34(2):168-78. doi: 10.1016/j.molcel.2009.02.025.
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Regulation of Hox gene activity by transcriptional elongation in Drosophila.果蝇中转录延伸对Hox基因活性的调控。
Curr Biol. 2009 Apr 28;19(8):688-93. doi: 10.1016/j.cub.2009.02.055. Epub 2009 Apr 2.
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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters.新生RNA测序揭示了人类启动子处广泛的暂停和分歧起始。
Science. 2008 Dec 19;322(5909):1845-8. doi: 10.1126/science.1162228. Epub 2008 Dec 4.
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Divergent transcription from active promoters.来自活性启动子的分歧转录
Science. 2008 Dec 19;322(5909):1849-51. doi: 10.1126/science.1162253. Epub 2008 Dec 4.
8
Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains.对多梳抑制复合体1(PRC1)和多梳抑制复合体2(PRC2)占据情况的全基因组分析确定了两类双价结构域。
PLoS Genet. 2008 Oct;4(10):e1000242. doi: 10.1371/journal.pgen.1000242. Epub 2008 Oct 31.
9
NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly.NELF介导的RNA聚合酶II停滞可通过阻断启动子近端核小体组装来增强基因表达。
Genes Dev. 2008 Jul 15;22(14):1921-33. doi: 10.1101/gad.1643208.
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Polycomb complexes and epigenetic states.多梳复合体与表观遗传状态。
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RNA 聚合酶 II 的修饰在调控基因表达状态中起着关键作用。

Modifications of RNA polymerase II are pivotal in regulating gene expression states.

机构信息

Genome Function Group, MRC Clinical Sciences Centre, Imperial College School of Medicine, Hammersmith Hospital Campus, Du Cane Road, London W12 0NN, UK.

出版信息

EMBO Rep. 2009 Nov;10(11):1213-9. doi: 10.1038/embor.2009.221. Epub 2009 Oct 16.

DOI:10.1038/embor.2009.221
PMID:19834511
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2775184/
Abstract

The regulation of gene expression programmes is essential for the generation of diverse cell types during development and for adaptation to environmental signals. RNA polymerase II (RNAPII) transcribes genetic information and coordinates the recruitment of accessory proteins that are responsible for the establishment of active chromatin states and transcript maturation. RNAPII is post-translationally modified at active genes during transcription initiation, elongation and termination, and thereby recruits specific histone and RNA modifiers. RNAPII complexes are also located at silent genes in promoter-proximal paused configurations that provide dynamic transcriptional regulation downstream from initiation. In embryonic stem cells, silent developmental regulator genes that are repressed by Polycomb are associated with a form of RNAPII that can elongate through coding regions but that lacks the post-translational modifications that are important for coupling RNA synthesis to co-transcriptional maturation. Here, we discuss the mechanisms through which the transcription of silent genes might be dissociated from productive expression, and the sophisticated interplay between the transcriptional machinery, Polycomb repression and RNA processing.

摘要

基因表达程序的调控对于发育过程中产生多样化的细胞类型以及适应环境信号至关重要。RNA 聚合酶 II(RNAPII)转录遗传信息,并协调募集辅助蛋白,这些蛋白负责建立活性染色质状态和转录成熟。在转录起始、延伸和终止过程中,RNAPII 在活性基因上进行翻译后修饰,从而募集特定的组蛋白和 RNA 修饰物。RNAPII 复合物也位于沉默基因的启动子近端暂停构象中,为起始下游的动态转录调控提供了基础。在胚胎干细胞中,被 Polycomb 抑制的沉默发育调节剂基因与一种能够通过编码区延伸但缺乏与 RNA 合成偶联到共转录成熟相关的翻译后修饰的 RNAPII 形式相关联。在这里,我们讨论了沉默基因的转录如何与有功能的表达分离的机制,以及转录机制、Polycomb 抑制和 RNA 加工之间的复杂相互作用。