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骨化三醇上调 5-脂氧合酶基因远端功能维生素 D 反应元件处的开放染色质和延伸标记物。

Calcitriol upregulates open chromatin and elongation markers at functional vitamin D response elements in the distal part of the 5-lipoxygenase gene.

机构信息

Institute of Pharmaceutical Chemistry/ZAFES, University of Frankfurt, Max-von-Laue-Str. 9, D-60438 Frankfurt, Germany.

出版信息

J Mol Biol. 2010 Jan 29;395(4):884-96. doi: 10.1016/j.jmb.2009.10.022. Epub 2009 Oct 24.

DOI:10.1016/j.jmb.2009.10.022
PMID:19837082
Abstract

5-Lipoxygenase (5-LO) gene expression is strongly upregulated during induction of myeloid cell differentiation by 1alpha,25-dihydroxyvitamin D(3) (calcitriol) and transforming growth factor-beta (TGFbeta) in a promoter-independent manner. In an activity-guided approach using reporter gene assays where the distal part of the 5-LO gene was included in the reporter gene plasmid, we localized vitamin D response elements (VDREs) within exon 10, exon 12, and intron M. We found that these newly identified VDRE sites are bound by vitamin D receptor both in vitro by gel-shift analysis and in vivo by chromatin immunoprecipitation assays. In reporter gene assays, the distal part of the 5-LO gene has promoter-like activity that is inducible by calcitriol in a vitamin D receptor-dependent manner. The vitamin D effects were attenuated when the VDREs in exon 10, exon 12, and intron M were deleted or mutated. When we analyzed the effects of calcitriol plus TGFbeta on chromatin modifications at exon 10, exon 12, and intron M of the 5-LO gene in Mono Mac 6 cells by chromatin immunoprecipitation analysis, we found an increase in histone H4 K20 monomethylation and a prominent presence of histone H3 K36 trimethylation. Combined treatment with calcitriol and TGFbeta also increased histone H4 acetylation, a marker for open chromatin, and the elongation form of RNA polymerase II at these sites, whereas the transcription initiation marker histone H3 K4 trimethylation was almost undetectable. The data suggest that calcitriol induces chromatin opening and transcript elongation via VDREs located at the 3'-end of the 5-LO gene.

摘要

5-脂氧合酶(5-LO)基因的表达在 1α,25-二羟维生素 D(3)(骨化三醇)和转化生长因子-β(TGFβ)诱导髓样细胞分化过程中被强烈上调,这种上调是在启动子非依赖性的方式下发生的。在一个使用报告基因检测的活性导向方法中,5-LO 基因的远端部分被包含在报告基因质粒中,我们在第 10 外显子、第 12 外显子和内含子 M 中定位了维生素 D 反应元件(VDREs)。我们发现这些新鉴定的 VDRE 位点在体外通过凝胶迁移分析和体内通过染色质免疫沉淀分析被维生素 D 受体结合。在报告基因检测中,5-LO 基因的远端部分具有启动子样活性,这种活性可被骨化三醇以维生素 D 受体依赖的方式诱导。当第 10 外显子、第 12 外显子和内含子 M 中的 VDRE 被删除或突变时,维生素 D 的作用会减弱。当我们通过染色质免疫沉淀分析分析 Mono Mac 6 细胞中 5-LO 基因第 10 外显子、第 12 外显子和内含子 M 处的骨化三醇加 TGFβ对染色质修饰的影响时,我们发现组蛋白 H4 K20 单甲基化增加,并且组蛋白 H3 K36 三甲基化明显存在。骨化三醇和 TGFβ的联合处理还增加了这些位点处组蛋白 H4 乙酰化(开放染色质的标志物)和 RNA 聚合酶 II 的延伸形式,而转录起始标志物组蛋白 H3 K4 三甲基化几乎检测不到。这些数据表明,骨化三醇通过位于 5-LO 基因 3'-末端的 VDRE 诱导染色质开放和转录延伸。

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