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本文引用的文献

1
Biochemical and structural characterization of the paralogous benzoate CoA ligases from Burkholderia xenovorans LB400: defining the entry point into the novel benzoate oxidation (box) pathway.嗜麦芽窄食单胞菌LB400中同源苯甲酸辅酶A连接酶的生化与结构表征:确定进入新型苯甲酸氧化(BOX)途径的切入点。
J Mol Biol. 2007 Nov 2;373(4):965-77. doi: 10.1016/j.jmb.2007.08.008. Epub 2007 Aug 19.
2
In vivo and in vitro investigation of transcriptional regulation by DntR.DntR对转录调控的体内和体外研究。
J Mol Biol. 2007 Sep 21;372(3):571-82. doi: 10.1016/j.jmb.2007.06.076. Epub 2007 Jul 3.
3
Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400.关于伯克霍尔德氏菌LB400中苯甲酸酯分解代谢途径冗余作用的遗传和基因组学见解。
Appl Environ Microbiol. 2006 Jan;72(1):585-95. doi: 10.1128/AEM.72.1.585-595.2006.
4
Growth substrate- and phase-specific expression of biphenyl, benzoate, and C1 metabolic pathways in Burkholderia xenovorans LB400.伯克霍尔德氏菌LB400中,联苯、苯甲酸酯和C1代谢途径的生长底物特异性和阶段特异性表达
J Bacteriol. 2005 Dec;187(23):7996-8005. doi: 10.1128/JB.187.23.7996-8005.2005.
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Bacterial transcriptional regulators for degradation pathways of aromatic compounds.用于芳香族化合物降解途径的细菌转录调节因子。
Microbiol Mol Biol Rev. 2004 Sep;68(3):474-500, table of contents. doi: 10.1128/MMBR.68.3.474-500.2004.
6
Biphenyl and benzoate metabolism in a genomic context: outlining genome-wide metabolic networks in Burkholderia xenovorans LB400.基因组背景下的联苯和苯甲酸盐代谢:勾勒洋葱伯克霍尔德菌LB400的全基因组代谢网络
Appl Environ Microbiol. 2004 Aug;70(8):4961-70. doi: 10.1128/AEM.70.8.4961-4970.2004.
7
Development of a bacterial biosensor for nitrotoluenes: the crystal structure of the transcriptional regulator DntR.用于硝基甲苯的细菌生物传感器的开发:转录调节因子DntR的晶体结构。
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8
Crystal structure of a full-length LysR-type transcriptional regulator, CbnR: unusual combination of two subunit forms and molecular bases for causing and changing DNA bend.全长LysR型转录调节因子CbnR的晶体结构:两种亚基形式的异常组合以及引起和改变DNA弯曲的分子基础。
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9
The finer things in X-ray diffraction data collection.X射线衍射数据收集的精妙之处。
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10
Solvent content of protein crystals.蛋白质晶体的溶剂含量。
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嗜麦芽窄食单胞菌LB400中苯甲酸氧化途径假定转录调节因子的纯化与结晶

Purification and crystallization of a putative transcriptional regulator of the benzoate oxidation pathway in Burkholderia xenovorans LB400.

作者信息

Law Adrienne M, Bains Jasleen, Boulanger Martin J

机构信息

Department of Biochemistry and Microbiology, University of Victoria, PO Box 3055 STN CSC, Victoria, BC V8W 3P6, Canada.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Oct 1;65(Pt 10):1001-3. doi: 10.1107/S1744309109032321. Epub 2009 Sep 23.

DOI:10.1107/S1744309109032321
PMID:19851006
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2765885/
Abstract

Burkholderia xenovorans LB400 harbours two paralogous copies of the recently discovered benzoate oxidation (box) pathway. While both copies are functional, the paralogues are differentially regulated and flanked by putative transcriptional regulators from distinct families. The putative LysR-type transcriptional regulator (LTTR) adjacent to the megaplasmid-encoded box enzymes, Bxe_C0898, has been produced recombinantly in Escherichia coli and purified to homogeneity. Gel-filtration studies show that Bxe_C0898 is a tetramer in solution, consistent with previously characterized LTTRs. Bxe_C0898 crystallized with four molecules in the asymmetric unit of the P4(3)2(1)2/P4(1)2(1)2 unit cell with a solvent content of 61.19%, as indicated by processing of the X-ray diffraction data. DNA-protection assays are currently under way in order to identify potential operator regions for this LTTR and to define its role in regulation of the box pathway.

摘要

嗜麦芽窄食单胞菌LB400含有最近发现的苯甲酸氧化(box)途径的两个旁系同源拷贝。虽然这两个拷贝都具有功能,但旁系同源物受到不同的调控,并且两侧是来自不同家族的假定转录调节因子。与大质粒编码的box酶Bxe_C0898相邻的假定赖氨酸R型转录调节因子(LTTR)已在大肠杆菌中重组表达并纯化至同质。凝胶过滤研究表明,Bxe_C0898在溶液中是四聚体,这与先前表征的LTTR一致。如X射线衍射数据处理所示,Bxe_C0898在P4(3)2(1)2/P4(1)2(1)2晶胞的不对称单元中与四个分子结晶,溶剂含量为61.19%。目前正在进行DNA保护试验,以确定该LTTR的潜在操纵子区域,并确定其在box途径调控中的作用。