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在β-磷酸葡萄糖变位酶的活性部位,MgF(3)(-) 和 alpha-半乳糖 1-磷酸形成了磷酸转移的过渡态类似物。

MgF(3)(-) and alpha-galactose 1-phosphate in the active site of beta-phosphoglucomutase form a transition state analogue of phosphoryl transfer.

机构信息

Department of Molecular Biology & Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.

出版信息

J Am Chem Soc. 2009 Nov 18;131(45):16334-5. doi: 10.1021/ja905972m.

DOI:10.1021/ja905972m
PMID:19852484
Abstract

(19)F-based NMR analysis and hydrogen/deuterium primary isotope shifts establish the formation of a highly populated solution-state trigonal bipyramidal complex involving beta-phosphoglucomutase (beta-PGM), alpha-galactose 1-phosphate (alphaGal1P), and trifluoromagnesate (MgF(3)(-)), PGM-MgF(3)-alphaGal1P, that is a transition state analogue for phosphoryl transfer. Full backbone resonance assignment of the protein shows that its structure is in the closed conformation required for catalytic activity and is closely related to the corresponding complex with glucose 6-phosphate, which we have recently identified using NMR analysis in solution and X-ray crystallography in the solid state. The previous identification of three structural waters in a PGM-alphaGal1P binary substrate complex had indicated that, in the presence of alphaGal1P, magnesium ions, and fluoride, beta-PGM should indeed form a PGM-MgF(3)-alphaGal1P-TSA complex whereas, in the solid-state, apparently it did not. This cast doubt on the validity of the interpretation of MgF(3)(-) complexes. The present work establishes that, in solution, the expectation that a PGM-MgF(3)-alphaGal1P-TSA complex should readily form is fulfilled. These results thus refute the final evidence used to claim that the trigonal bipyramidal species observed in some solid-state structures of complexes involving beta-PGM are pentaoxyphosphorane intermediates.

摘要

(19)F 基于 NMR 分析和氢/氘主同位素位移确立了高度 populated 的溶液态三角双锥配合物的形成,涉及β-磷酸葡萄糖变位酶 (β-PGM)、α-半乳糖 1-磷酸 (αGal1P) 和三氟甲镁酸盐 (MgF(3)(-)),PGM-MgF(3)-αGal1P,它是磷酰基转移的过渡态类似物。蛋白质的全骨架共振分配表明其结构处于催化活性所需的封闭构象,与用 NMR 分析在溶液中以及用 X 射线晶体学在固态中最近鉴定的相应复合物葡萄糖 6-磷酸密切相关。先前在 PGM-αGal1P 二元底物复合物中鉴定出三个结构水表明,在存在αGal1P、镁离子和氟化物的情况下,β-PGM 确实应该形成 PGM-MgF(3)-αGal1P-TSA 配合物,而在固态中,显然没有形成。这对 MgF(3)(-)复合物解释的有效性提出了质疑。本工作确定,在溶液中,形成 PGM-MgF(3)-αGal1P-TSA 配合物的预期是可以实现的。这些结果因此反驳了用于声称在涉及β-PGM 的一些复合物的某些固态结构中观察到的三角双锥物种是五氧磷烷中间体的最终证据。

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