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低复杂性区域充当转运RNA海绵,以帮助疟原虫蛋白质的共翻译折叠。

Low Complexity Regions behave as tRNA sponges to help co-translational folding of plasmodial proteins.

作者信息

Frugier Magali, Bour Tania, Ayach Maya, Santos Manuel A S, Rudinger-Thirion Joëlle, Théobald-Dietrich Anne, Pizzi Elizabetta

机构信息

Architecture et Réactivité de l'ARN, Université de Strasbourg, CNRS, IBMC, 15 rue René Descartes, 67084 Strasbourg Cedex, France.

出版信息

FEBS Lett. 2010 Jan 21;584(2):448-54. doi: 10.1016/j.febslet.2009.11.004.

Abstract

In most organisms, the information necessary to specify the native 3D-structures of proteins is encoded in the corresponding mRNA sequences. Translational accuracy and efficiency are coupled and sequences that are slowly translated play an essential role in the concomitant folding of protein domains. Here, we suggest that the well-known mechanisms for the regulation of translational efficiency, which involves mRNA structure and/or asymmetric tRNA abundance, do not apply to all organisms. We propose that Plasmodium, the parasite responsible for malaria, uses an alternative strategy to slow down ribosomal speed and avoid multidomain protein misfolding during translation. In our model, the abundant Low Complexity Regions present in Plasmodium proteins replace the codon preferences, which influence the assembly of protein secondary structures.

摘要

在大多数生物体中,指定蛋白质天然三维结构所需的信息编码在相应的mRNA序列中。翻译准确性和效率相互关联,翻译缓慢的序列在蛋白质结构域的伴随折叠中起重要作用。在这里,我们认为,涉及mRNA结构和/或不对称tRNA丰度的众所周知的翻译效率调节机制并不适用于所有生物体。我们提出,导致疟疾的寄生虫疟原虫采用了一种替代策略来减缓核糖体速度,并避免翻译过程中多结构域蛋白质错误折叠。在我们的模型中,疟原虫蛋白质中大量存在的低复杂性区域取代了密码子偏好,而密码子偏好会影响蛋白质二级结构的组装。

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