Mamasakhlisov Yevgeni Sh, Todd Brian A, Badasyan Artem V, Mkrtchyan Anna V, Morozov Vladimir F, Parsegian V Adrian
Department of Molecular Physics, Yerevan State University, 1 Al Manougian Str, Yerevan 375025, Armenia.
Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Sep;80(3 Pt 1):031915. doi: 10.1103/PhysRevE.80.031915. Epub 2009 Sep 24.
Motivated by measurements on stretched double-stranded DNA in the presence of multivalent cations, we develop a statistical mechanical model for the compaction of an insoluble semiflexible polymer under tension. Using a mean-field approach, we determine the order of the extended-to-compact transition and provide an interpretation for the magnitude and interval of tensions over which compaction takes place. In the simplest thermodynamic limit of an infinitely long homogeneous polymer, compaction is a first-order transition that occurs at a single value of tension. For finite length chains or for heterogeneous polymers, the transition progresses over an interval of tension. Our theory provides an interpretation for the result of single-molecule experiments in terms of microscopic parameters such as persistence length and free energy of condensation.
受在多价阳离子存在下对拉伸双链DNA的测量结果启发,我们开发了一个统计力学模型,用于描述在张力作用下不溶性半柔性聚合物的压缩过程。使用平均场方法,我们确定了从伸展到紧凑转变的阶数,并对发生压缩的张力大小和区间给出了解释。在无限长均匀聚合物的最简单热力学极限下,压缩是在单一张力值处发生的一阶转变。对于有限长度的链或非均匀聚合物,转变在一个张力区间内进行。我们的理论根据诸如持久长度和凝聚自由能等微观参数,对单分子实验结果给出了解释。