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EcoRV核酸内切酶与同源和非同源DNA片段复合物的结晶。

Crystallization of complexes of EcoRV endonuclease with cognate and non-cognate DNA fragments.

作者信息

Winkler F K, D'Arcy A, Blöcker H, Frank R, van Boom J H

机构信息

European Molecular Biology Laboratory, Heidelberg, Germany.

出版信息

J Mol Biol. 1991 Jan 20;217(2):235-8. doi: 10.1016/0022-2836(91)90536-f.

DOI:10.1016/0022-2836(91)90536-f
PMID:1992160
Abstract

Complexes of the type II restriction endonuclease EcoRV with a variety of short, selfcomplementary deoxyoligonucleotides have been crystallized. The best crystals diffract to about 2.7 A resolution and consist of 1:1 complexes between endonuclease dimers and duplexes of the cognate decamer GGGATATCCC containing the hexameric RV recognition sequence GATATC. Crystals with the non-cognate DNA octamer duplexes CGAGCTCG and CGAATTCG diffract to 3.0 and 3.5 A resolution, respectively, and contain two DNA duplexes per enzyme dimer.

摘要

II型限制性内切酶EcoRV与多种短的、自我互补的脱氧寡核苷酸形成的复合物已被结晶。最佳晶体的衍射分辨率约为2.7埃,由内切酶二聚体与包含六聚体RV识别序列GATATC的同源十聚体GGGATATCCC的双链体之间的1:1复合物组成。与非同源DNA八聚体双链体CGAGCTCG和CGAATTCG形成的晶体,其衍射分辨率分别为3.0埃和3.5埃,每个酶二聚体包含两条DNA双链体。

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引用本文的文献

1
The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments.EcoRV核酸内切酶及其与同源和非同源DNA片段复合物的晶体结构。
EMBO J. 1993 May;12(5):1781-95. doi: 10.2210/pdb4rve/pdb.
2
Effect of site-specific methylation on restriction endonucleases and DNA modification methyltransferases.位点特异性甲基化对限制性内切核酸酶和DNA修饰甲基转移酶的影响。
Nucleic Acids Res. 1993 Jul 1;21(13):3139-54. doi: 10.1093/nar/21.13.3139.
3
Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases.
位点特异性修饰对限制性核酸内切酶和DNA修饰甲基转移酶的影响。
Nucleic Acids Res. 1994 Sep;22(17):3640-59. doi: 10.1093/nar/22.17.3640.
4
Structural aspects of protein-DNA recognition.蛋白质与DNA识别的结构方面。
Biochem J. 1991 Aug 15;278 ( Pt 1)(Pt 1):1-23. doi: 10.1042/bj2780001.