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理性设计 GH1β-糖苷酶以防止转糖苷反应过程中的自缩合。

Rational design of a GH1 beta-glycosidase to prevent self-condensation during the transglycosylation reaction.

机构信息

Faculté des Sciences et des Techniques, Biotechnologie, Biocatalyse, Biorégulation (UMR CNRS 6204) Nantes University, PRES UNAM, 2 rue de la Houssinière, BP 92208, F-44322 Nantes cedex 3, France.

出版信息

Protein Eng Des Sel. 2010 Jan;23(1):43-9. doi: 10.1093/protein/gzp068.

Abstract

Mutant N282T of a thermostable beta-glycosidase from GH1 family (TtbetaGly) presenting a high transglycosidase activity was previously obtained by directed evolution. However, it displays a self-condensation activity with the donor 2-nitrophenyl-beta-d-galactopyranoside (oNPGal) which competes with the condensation reaction and entails undesirable effects. In order to prevent this reaction, we rationally modified this enzyme at the [+1]/[+2] subsites so that oNPGal would bind less tightly. Molecular modeling (MM) suggested the mutation A221W, which decreased the affinity of the donor at these sites and moved it away from the bound galactose at the -1 subsite. A single (A221W) and a double mutant (A221W/N282T) were constructed, and they gave rise to a drastic decrease in self-condensation. The A221W mutant had no transglycosylation activity whereas the A221W/N282T mutant still displayed a condensation activity, comparable to that of the N282T mutant for the transfer on pNPGlcNAc. MM revealed that the double mutant A221W/N282T could induce the synthesis of a glycosidic bond between a donor and an acceptor displaying an equatorial 4-position. Moreover, it is suggested that mutation N282T could change the orientation of residue N219, leading to a stabilization of the acceptor with a new hydrogen bond. This finding opens the way to further improvements of evolved transglycosidases.

摘要

先前通过定向进化获得了 GH1 家族耐热β-糖苷酶(TtbetaGly)的突变体 N282T,该突变体具有高转糖苷酶活性。然而,它与供体 2-硝基苯-β-d-半乳糖吡喃糖苷(oNPGal)发生自缩合反应,该反应与缩合反应竞争,并产生不良影响。为了防止这种反应,我们在[+1]/[+2]亚位点对该酶进行了合理修饰,从而使 oNPGal 的结合不那么紧密。分子建模(MM)表明突变 A221W 降低了供体在这些位点的亲和力,并使其远离-1 亚位点结合的半乳糖。构建了单个(A221W)和双突变体(A221W/N282T),它们导致自缩合急剧减少。A221W 突变体没有转糖苷活性,而 A221W/N282T 突变体仍显示出与 N282T 突变体相当的缩合活性,用于转移到 pNPGlcNAc 上。MM 表明,双突变体 A221W/N282T 可以诱导供体和受体之间形成糖苷键,受体具有赤道 4-位。此外,据推测突变 N282T 可以改变残基 N219 的取向,导致与新氢键结合的受体稳定。这一发现为进一步改进进化的转糖苷酶开辟了道路。

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