Zada Numan Saleh, Belduz Ali Osman, Alessa Abdulrahman H, Güler Halil Ibrahim, Karaoğlan Mine, Badshah Malik, Shah Aamer Ali, Kalsoom Aasia, Khan Samiullah
Department of Microbiology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan.
Department of Biology, Faculty of Sciences, Karadeniz Technical University, Trabzon, 61080, Turkey.
BMC Biotechnol. 2025 Jul 1;25(1):52. doi: 10.1186/s12896-025-00984-4.
β-glucosidase from Anoxybacillus ayderensis A9 (BglA9) is a potent enzyme for enzymatic hydrolysis of polydatin to resveratrol. Based on structural and bioinformatics analysis an area near + 2 subsite of the active site pocket of BglA9 was selected and single point mutations were introduced with the aim to enhance the catalytic efficiency of the enzyme towards pNPG and polydatin. The active site region selected for mutations is non-conserved between different glycoside hydrolase family 1 (GH1) enzymes and is located at the end of β-strand 6. The changes introduced in the active site residues were L221S, N222S and G226Q. The E. coli BL21 (DE3) cells were used for the expression of mutant proteins and purification was achieved by Ni-NTA column chromatography. The thermal and pH stability was retained in all the mutants. The proteins with mutated residue resulted in variations in K and k/K (catalytic efficiency) values. The K values of mutants for pNPG and polydatin were lowered, indicating a better enzyme-substrate complex, while variations in k/K values were observed for both substrates. The docking analysis supported these observations and by comparing binding energies; the mutant N222S showed the best docked complex. This investigation suggests that the + 2 subsite of BglA9 is an interesting area to be mutated and changes in amino acid residues at this site can influence both K and catalytic efficiency. The deglycosylated derivates were also compared for their antioxidant activities and showed enhanced antioxidant potential as compared to glycoside measured by DPPH assay.
来自艾登芽孢杆菌A9(BglA9)的β-葡萄糖苷酶是一种将虎杖苷酶解为白藜芦醇的高效酶。基于结构和生物信息学分析,选择了BglA9活性位点口袋+2亚位点附近的一个区域,并引入单点突变,旨在提高该酶对对硝基苯-β-D-葡萄糖苷(pNPG)和虎杖苷的催化效率。选择用于突变的活性位点区域在不同的糖苷水解酶家族1(GH1)酶之间是非保守的,并且位于β链6的末端。在活性位点残基处引入的变化是L221S、N222S和G226Q。大肠杆菌BL21(DE3)细胞用于突变蛋白的表达,并通过镍-亚氨基二乙酸(Ni-NTA)柱色谱法实现纯化。所有突变体都保留了热稳定性和pH稳定性。具有突变残基的蛋白质导致米氏常数(K)和催化效率(k/K)值发生变化。突变体对pNPG和虎杖苷的K值降低,表明酶-底物复合物更好,而两种底物的k/K值均有变化。对接分析支持了这些观察结果,通过比较结合能,突变体N222S显示出最佳的对接复合物。这项研究表明,BglA9的+2亚位点是一个有趣的可突变区域,该位点氨基酸残基的变化会影响K值和催化效率。还比较了去糖基化衍生物的抗氧化活性,与通过二苯基苦味酰基自由基(DPPH)测定法测得的糖苷相比,其抗氧化潜力增强。