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玉米赤霉酸刺激样基因家族及其在侧根发育中的作用。

The Gibberellic Acid Stimulated-Like gene family in maize and its role in lateral root development.

机构信息

Center for Plant Molecular Biology, Department of General Genetics, Eberhard Karls University Tuebingen, 72076 Tuebingen, Germany.

出版信息

Plant Physiol. 2010 Jan;152(1):356-65. doi: 10.1104/pp.109.149054. Epub 2009 Nov 19.

Abstract

In an approach to study lateral root development in monocots, genome-wide searches for homologs of the Gibberellic Acid Stimulated Transcript-like (GAST-like) gene family in rice (Oryza sativa) and maize (Zea mays) were carried out. Six novel GAST-like genes in rice and 10 members of the gene family in maize, which were designated ZmGSL (for Z. mays Gibberellic Acid Stimulated-Like), were identified. The ZmGSL family encodes small proteins of 75 to 128 amino acids, which are characterized by a conserved 59 to 64 amino acid C-terminal domain. Within this domain, 17 amino acids, including 12 cysteines, are perfectly conserved. The transcript of the ZmGSL1 gene is differentially spliced into the alternative variants ZmGSL1a and ZmGSL1b, the latter of which is translated into a premature protein that lacks the C-terminal domain. The presence of an additional N-terminal cleavable signal sequence in eight of the 10 ZmGSL proteins suggests that they are secreted into the extracellular matrix. In-depth root-specific gene expression analyses carried out in the wild type and the lateral root mutants lrt1 and rum1 suggest a role for ZmGSL genes in early lateral root development, which is likely regulated by gibberellic acid. Expression patterns of ZmGSL1a and ZmGSL1b propose antagonistic functions of these splice variants during early lateral root formation.

摘要

为了研究单子叶植物侧根发育,我们在水稻(Oryza sativa)和玉米(Zea mays)中进行了全基因组搜索,寻找赤霉素刺激转录物样(GAST-like)基因家族的同源物。在水稻中发现了 6 个新的 GAST-like 基因,在玉米中发现了 10 个该基因家族的成员,被命名为 ZmGSL(代表 Zea mays Gibberellic Acid Stimulated-Like)。ZmGSL 家族编码 75 到 128 个氨基酸的小蛋白,其特征是保守的 59 到 64 个氨基酸的 C 端结构域。在这个结构域内,包括 12 个半胱氨酸在内的 17 个氨基酸是完全保守的。ZmGSL1 基因的转录本通过差异剪接形成两种选择性变体 ZmGSL1a 和 ZmGSL1b,后者翻译成缺乏 C 端结构域的提前终止蛋白。10 个 ZmGSL 蛋白中有 8 个具有额外的可切割的 N 端信号序列,表明它们被分泌到细胞外基质中。在野生型和侧根突变体 lrt1 和 rum1 中进行的深入的根特异性基因表达分析表明,ZmGSL 基因在早期侧根发育中起作用,这可能受到赤霉素的调节。ZmGSL1a 和 ZmGSL1b 的表达模式表明这些剪接变体在早期侧根形成过程中具有拮抗作用。

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