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超氧化物歧化酶(FeSOD)活性位点及其周围组氨酸残基的15N-核磁共振表征

15N-NMR characterization of His residues in and around the active site of FeSOD.

作者信息

Miller Anne-Frances, Yikilmaz Emine, Vathyam Surekha

机构信息

Dept. Chemistry, University of Kentucky, Lexington, KY 40506-0055, USA.

出版信息

Biochim Biophys Acta. 2010 Feb;1804(2):275-84. doi: 10.1016/j.bbapap.2009.11.009. Epub 2009 Nov 18.

Abstract

We have exploited (15)N-NMR to observe histidine (His) side chains in and around the active site of Fe-containing superoxide dismutase (FeSOD). In the oxidized state, we observe all the non-ligand His side chains and in the reduced state we can account for all the signals in the imidazole spectral region in terms of the non-ligand His', paramagnetically displaced signals from two backbone amides, and the side chain of glutamine 69 (Gln69). We also observe signals from the His' that ligate Fe(II). These confirm that neither the Q69H nor the Q69E mutation strongly affects the Fe(II) electronic structure, despite the 250 mV and >660 mV increases in E(m) they produce, respectively. In the Q69H mutant, we observe two new signals attributable to the His introduced into the active site in place of Gln69. One corresponds to a protonated N and the other is strongly paramagnetically shifted, to 500 ppm. The strong paramagnetic effects support the existence of an H-bond between His69 and the solvent molecule coordinated to Fe(II), as proposed based on crystallography. Based on previous information that His69 is neutral, we infer that the shifted N is not protonated. Therefore, we propose that this N represents a site of H-bond acceptance from coordinated solvent, representing a reversal of the polarity of this H-bond from that in WT (wild-type) FeSOD protein. We also present evidence that substrate analogs bind to Fe(II)SOD outside the Fe(II) coordination sphere, affecting Gln69 but without direct involvement of His30.

摘要

我们利用(15)N-核磁共振来观察含铁超氧化物歧化酶(FeSOD)活性位点及其周围的组氨酸(His)侧链。在氧化状态下,我们观察到所有非配体His侧链,在还原状态下,我们可以根据非配体His'、来自两个主链酰胺的顺磁位移信号以及谷氨酰胺69(Gln69)的侧链来解释咪唑光谱区域中的所有信号。我们还观察到与Fe(II)配位的His'的信号。这些结果证实,尽管Q69H和Q69E突变分别使E(m)增加了250 mV和>660 mV,但它们都没有强烈影响Fe(II)的电子结构。在Q69H突变体中,我们观察到两个新信号,它们归因于取代Gln69引入活性位点的His。一个对应于质子化的N,另一个有很强的顺磁位移,达到500 ppm。强烈的顺磁效应支持了His69与配位到Fe(II)的溶剂分子之间存在氢键,这是基于晶体学提出的。根据之前关于His69是中性的信息,我们推断位移的N没有质子化。因此,我们提出这个N代表来自配位溶剂的氢键接受位点,这表明该氢键的极性与野生型(WT)FeSOD蛋白中的相反。我们还提供了证据表明底物类似物在Fe(II)配位球外部与Fe(II)SOD结合,影响Gln69,但His30没有直接参与。

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1
Raster3D: photorealistic molecular graphics.
Methods Enzymol. 1997;277:505-24. doi: 10.1016/s0076-6879(97)77028-9.
5
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6
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