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噬菌体T5 DNA聚合酶编码基因的克隆与过表达

Cloning and overexpression of the gene encoding bacteriophage T5 DNA polymerase.

作者信息

Chatterjee D K, Fujimura R K, Campbell J H, Gerard G F

机构信息

Molecular Biology Research and Development, Bethesda Research Laboratory, Life Technologies, Inc., Gaithersburg, MD 20877.

出版信息

Gene. 1991 Jan 2;97(1):13-9. doi: 10.1016/0378-1119(91)90004-u.

DOI:10.1016/0378-1119(91)90004-u
PMID:1995424
Abstract

T5 DNA polymerase (T5Pol), an essential enzyme for bacteriophage T5 DNA replication, is unusual because of its high processivity and strand-displacing ability. These two properties in a single polypeptide make T5Pol an ideal candidate for structural and functional analysis. Therefore, the structural gene encoding the DNA polymerase of bacteriophage T5 (T5pol) has been cloned and overexpressed in Escherichia coli. Elimination of sequences upstream from the 5' end of the T5pol by exonuclease III digestion was necessary to obtain stable clones containing a full-length structural gene. Determination of the nucleotide (nt) sequence of the region deleted during clone construction revealed the presence of a promoter sequence having extensive homology with known T5 phage 'early' promoters. By primer extension of mRNA isolated from T5 phage-infected cells, two successive G residues located 6 and 7 nt downstream from the -10 region of this promoter were identified as the initiating nt at the 5' end of T5pol mRNA. T5Pol produced in E. coli from the cloned gene under control of a tac or phage lambda pL promoter represented as much as 40% of total cell protein. The majority of the T5Pol present in extracts of E. coli was insoluble. The amount of active enzyme present was estimated to be a maximum of tenfold higher than that found in extracts of T5 phage-infected cells.

摘要

T5 DNA聚合酶(T5Pol)是噬菌体T5 DNA复制所必需的一种酶,因其具有高持续合成能力和链置换能力而显得不同寻常。单一多肽中的这两种特性使T5Pol成为结构和功能分析的理想候选对象。因此,编码噬菌体T5 DNA聚合酶(T5pol)的结构基因已被克隆并在大肠杆菌中过量表达。为了获得包含全长结构基因的稳定克隆,有必要通过核酸外切酶III消化去除T5pol 5'端上游的序列。对克隆构建过程中缺失区域的核苷酸(nt)序列进行测定,结果显示存在一个与已知T5噬菌体“早期”启动子具有广泛同源性的启动子序列。通过对从T5噬菌体感染细胞中分离的mRNA进行引物延伸,确定了位于该启动子-10区域下游6和7 nt处的两个连续G残基为T5pol mRNA 5'端的起始核苷酸。在tac或噬菌体λ pL启动子控制下,从克隆基因在大肠杆菌中产生的T5Pol占总细胞蛋白的比例高达40%。大肠杆菌提取物中存在的大部分T5Pol是不溶性的。估计存在的活性酶量最多比T5噬菌体感染细胞提取物中的活性酶量高十倍。

相似文献

1
Cloning and overexpression of the gene encoding bacteriophage T5 DNA polymerase.噬菌体T5 DNA聚合酶编码基因的克隆与过表达
Gene. 1991 Jan 2;97(1):13-9. doi: 10.1016/0378-1119(91)90004-u.
2
T5 DNA polymerase: structural--functional relationships to other DNA polymerases.T5 DNA聚合酶:与其他DNA聚合酶的结构-功能关系
Proc Natl Acad Sci U S A. 1989 Jun;86(12):4465-9. doi: 10.1073/pnas.86.12.4465.
3
Properties of overexpressed phage T5 D15 exonuclease. Similarities with Escherichia coli DNA polymerase I 5'-3' exonuclease.过表达的噬菌体T5 D15核酸外切酶的特性。与大肠杆菌DNA聚合酶I 5'-3'核酸外切酶的相似性。
J Biol Chem. 1990 Oct 25;265(30):18311-7.
4
Cloning, sequencing, and recombinational analysis with bacteriophage BF23 of the bacteriophage T5 oad gene encoding the receptor-binding protein.用噬菌体BF23对编码受体结合蛋白的噬菌体T5 oad基因进行克隆、测序及重组分析。
J Bacteriol. 1991 Feb;173(3):1287-97. doi: 10.1128/jb.173.3.1287-1297.1991.
5
[The structure of 2 promoters and a transcription terminator from the region of early genes D10-D15 of bacteriophage T5].[来自噬菌体T5早期基因D10 - D15区域的两个启动子和一个转录终止子的结构]
Mol Gen Mikrobiol Virusol. 1987 Oct(10):14-9.
6
[Cloning fragments of bacteriophage T5 DNA, determining expression of phage-dependent ligase].[克隆噬菌体T5 DNA片段,测定噬菌体依赖性连接酶的表达]
Mol Biol (Mosk). 1981 May-Jun;15(3):538-46.
7
Bacteriophage T7 DNA polymerase: cloning and high-level expression.噬菌体T7 DNA聚合酶:克隆与高效表达
Proc Natl Acad Sci U S A. 1985 Oct;82(20):6783-7. doi: 10.1073/pnas.82.20.6783.
8
Physical locus of the DNA polymerase gene and genetic maps of bacteriophage T5 mutants.DNA聚合酶基因的物理定位及噬菌体T5突变体的遗传图谱。
J Virol. 1985 Feb;53(2):495-500. doi: 10.1128/JVI.53.2.495-500.1985.
9
Transcriptional mapping of a DNA replication gene cluster in bacteriophage T4. Sites for initiation, termination, and mRNA processing.噬菌体T4中DNA复制基因簇的转录图谱。起始、终止和mRNA加工位点。
J Biol Chem. 1990 Mar 25;265(9):5303-16.
10
Nucleotide sequence of a major class-III phage-T3 RNA-polymerase promoter located at 98.0% of phage-T3 genetic map.位于噬菌体T3遗传图谱98.0%处的一个主要III类噬菌体T3 RNA聚合酶启动子的核苷酸序列。
Gene. 1985;33(3):351-5. doi: 10.1016/0378-1119(85)90243-4.

引用本文的文献

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Bacteriophage T5 gene D10 encodes a branch-migration protein.噬菌体 T5 基因 D10 编码一个分支迁移蛋白。
Sci Rep. 2016 Dec 23;6:39414. doi: 10.1038/srep39414.
2
Cloning, sequencing, and expression of bacteriophage BF23 late genes 24 and 25 encoding tail proteins.编码尾部蛋白的噬菌体BF23晚期基因24和25的克隆、测序及表达
J Bacteriol. 1994 Dec;176(23):7280-90. doi: 10.1128/jb.176.23.7280-7290.1994.
3
Cloning and characterization of genes for the PvuI restriction and modification system.PvuI 限制与修饰系统基因的克隆及特性分析
Nucleic Acids Res. 1992 Nov 11;20(21):5743-7. doi: 10.1093/nar/20.21.5743.