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转录因子 FixK2 的翻译后调控,FixK2 是大豆根瘤菌共生的关键调节剂。

Posttranslational control of transcription factor FixK2, a key regulator for the Bradyrhizobium japonicum-soybean symbiosis.

机构信息

ETH, Institute of Microbiology, CH-8093 Zürich, Switzerland.

出版信息

Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21860-5. doi: 10.1073/pnas.0908097106. Epub 2009 Dec 2.

DOI:10.1073/pnas.0908097106
PMID:19955406
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2799828/
Abstract

Rhizobial FixK-like proteins play essential roles in activating genes for endosymbiotic life in legume root nodules, such as genes for micro-oxic respiration. In the facultative soybean symbiont, Bradyrhizobium japonicum, the FixK(2) protein is the key player in a complex regulatory network. The fixK(2) gene itself is activated by the 2-component regulatory system FixLJ in response to a moderate decrease of the oxygen tension, and the FixK(2) protein distributes and amplifies this response to the level of approximately 200 target genes. Unlike other members of the cAMP receptor protein family, to which FixK(2) belongs, the FixK(2) protein does not appear to be modulated by small effector molecules. Here, we show that a critical, single cysteine residue (C183) near the DNA-binding domain of FixK(2) confers sensitivity to oxidizing agents and reactive oxygen species. Oxidation-dependent inactivation occurs not only in vitro, as shown with cell-free transcription assays, but also in vivo, as shown by microarray-assisted transcriptome analysis of the FixK(2) regulon. The oxidation mechanism may involve a reversible dimerization by intermolecular disulfide-bridge formation and a direct, irreversible oxidation at the cysteine thiol, depending on the oxidizing agent. Mutational exchange of C183 to alanine renders FixK(2) resistant to oxidation, yet allows full activity, shown again both in vitro and in vivo. We hypothesize that posttranslational modification by reactive oxygen species is a means to counterbalance the cellular pool of active FixK(2), which would otherwise fill unrestrictedly through FixLJ-dependent synthesis.

摘要

根瘤菌 FixK 样蛋白在激活豆科植物根瘤共生生活的基因中发挥着重要作用,如微氧呼吸基因。在兼性大豆共生体根瘤菌中,FixK(2)蛋白是一个复杂调控网络的关键因子。FixK(2)基因本身通过 2 组分调节系统 FixLJ 被激活,以响应氧气张力的适度下降,FixK(2)蛋白将这种反应分配并放大到大约 200 个靶基因的水平。与 FixK(2)所属的 cAMP 受体蛋白家族的其他成员不同,FixK(2)蛋白似乎不受小分子效应物的调节。在这里,我们表明,FixK(2)的 DNA 结合域附近的一个关键的、单一的半胱氨酸残基(C183)赋予了对氧化剂和活性氧的敏感性。氧化依赖性失活不仅在体外发生,如无细胞转录分析所示,而且在体内发生,如 FixK(2)调控子的微阵列辅助转录组分析所示。氧化机制可能涉及通过分子间二硫键形成的可逆二聚化,以及取决于氧化剂的半胱氨酸巯基的直接、不可逆氧化。将 C183 突变为丙氨酸可使 FixK(2)抵抗氧化,但仍允许充分的活性,这再次在体外和体内得到证实。我们假设,活性氧的翻译后修饰是一种平衡细胞内活性 FixK(2)池的手段,否则通过 FixLJ 依赖性合成,FixK(2)池将不受限制地填充。

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本文引用的文献

1
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Proteins. 2009 Oct;77(1):174-80. doi: 10.1002/prot.22428.
2
Bacterial sensors of oxygen.细菌的氧气传感器。
Curr Opin Microbiol. 2009 Apr;12(2):145-51. doi: 10.1016/j.mib.2009.01.008. Epub 2009 Feb 24.
3
Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator.CRP-FNR 型转录调节因子 CprK 对卤代呼吸作用的调控的分子基础。
Mol Microbiol. 2008 Oct;70(1):151-67. doi: 10.1111/j.1365-2958.2008.06399.x. Epub 2008 Aug 20.
4
Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator.嗜热栖热菌SdrP(一种CRP/FNR家族转录调节因子)介导的全基因组基因表达。
Mol Microbiol. 2008 Oct;70(1):60-75. doi: 10.1111/j.1365-2958.2008.06388.x. Epub 2008 Aug 11.
5
Comprehensive assessment of the regulons controlled by the FixLJ-FixK2-FixK1 cascade in Bradyrhizobium japonicum.对日本慢生根瘤菌中由FixLJ-FixK2-FixK1级联调控的调节子的综合评估。
J Bacteriol. 2008 Oct;190(20):6568-79. doi: 10.1128/JB.00748-08. Epub 2008 Aug 8.
6
Transcription activation by NtcA and 2-oxoglutarate of three genes involved in heterocyst differentiation in the cyanobacterium Anabaena sp. strain PCC 7120.集胞藻属PCC 7120菌株中,NtcA和2-酮戊二酸对参与异形胞分化的三个基因的转录激活作用。
J Bacteriol. 2008 Sep;190(18):6126-33. doi: 10.1128/JB.00787-08. Epub 2008 Jul 25.
7
Oxidant-dependent switching between reversible and sacrificial oxidation pathways for Bacillus subtilis OhrR.枯草芽孢杆菌OhrR在可逆氧化途径和牺牲性氧化途径之间的氧化剂依赖性转换
Mol Microbiol. 2008 May;68(4):978-86. doi: 10.1111/j.1365-2958.2008.06200.x. Epub 2008 Mar 19.
8
Genome-wide transcript analysis of Bradyrhizobium japonicum bacteroids in soybean root nodules.大豆根瘤中慢生根瘤菌类菌体的全基因组转录分析。
Mol Plant Microbe Interact. 2007 Nov;20(11):1353-63. doi: 10.1094/MPMI-20-11-1353.
9
H2O2 is required for optimal establishment of the Medicago sativa/Sinorhizobium meliloti symbiosis.过氧化氢是苜蓿/苜蓿中华根瘤菌共生关系最佳建立所必需的。
J Bacteriol. 2007 Dec;189(23):8741-5. doi: 10.1128/JB.01130-07. Epub 2007 Oct 5.
10
Dissection of the Bradyrhizobium japonicum NifA+sigma54 regulon, and identification of a ferredoxin gene (fdxN) for symbiotic nitrogen fixation.慢生根瘤菌NifA+σ54调控子的剖析以及共生固氮铁氧化还原蛋白基因(fdxN)的鉴定。
Mol Genet Genomics. 2007 Sep;278(3):255-71. doi: 10.1007/s00438-007-0246-9. Epub 2007 Jun 15.