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过氧化氢酶晶体在液氮温度下的电子 cryomicroscopy 中最佳曝光的分辨率依赖性。

The resolution dependence of optimal exposures in liquid nitrogen temperature electron cryomicroscopy of catalase crystals.

机构信息

Molecular Structure and Function Program, The Hospital for Sick Children Research Institute, Canada.

出版信息

J Struct Biol. 2010 Mar;169(3):431-7. doi: 10.1016/j.jsb.2009.11.014. Epub 2009 Dec 1.

Abstract

Electron beam damage is the fundamental limit to resolution in electron cryomicroscopy (cryo-EM) of frozen, hydrated specimens. Radiation damage increases with the number of electrons used to obtain an image and affects information at higher spatial frequencies before low-resolution information. For the experimentalist, a balance exists between electron exposures sufficient to obtain a useful signal-to-noise ratio (SNR) in images and exposures that limit the damage to structural features. In single particle cryo-EM this balance is particularly delicate: low-resolution features must be imaged with a sufficient SNR to allow image alignment so that high-resolution features recorded below the noise level can be recovered by averaging independent images. By measuring the fading of Fourier components from images obtained at 200 kV of thin crystals of catalase embedded in ice, we have determined the electron exposures that will maximize the SNR at resolutions between 86 and 2.9A. These data allow for a rational choice of exposure for single particle cryo-EM. For example, for 20A resolution, the SNR is maximized at approximately 20e(-)/A(2), whereas for 3A resolution, it is maximized at approximately 10 e(-)/A(2). We illustrate the effects of exposure in single particle cryo-EM with data collected at approximately 12-15 and approximately 24-30 e(-)/A(2).

摘要

电子束损伤是冷冻、水合标本电子晶体学显微镜(cryo-EM)分辨率的基本限制。辐射损伤随用于获取图像的电子数量而增加,并在较低分辨率信息之前影响较高空间频率的信息。对于实验者来说,在足以获得图像中有用信噪比(SNR)的电子暴露量和限制结构特征损伤的暴露量之间存在平衡。在单颗粒 cryo-EM 中,这种平衡特别微妙:必须以足够的 SNR 对低分辨率特征进行成像,以允许图像对齐,以便可以通过对独立图像进行平均来恢复低于噪声水平记录的高分辨率特征。通过测量嵌入冰中的过氧化氢酶薄晶体在 200kV 下获得的图像中傅里叶分量的衰减,我们确定了将 SNR 最大化到 86 和 2.9A 之间分辨率的电子暴露量。这些数据允许对单颗粒 cryo-EM 进行合理的曝光选择。例如,对于 20A 的分辨率,大约在 20e(-)/A(2) 处达到 SNR 最大化,而对于 3A 的分辨率,大约在 10e(-)/A(2) 处达到 SNR 最大化。我们用大约 12-15 和大约 24-30e(-)/A(2) 处收集的数据说明了暴露在单颗粒 cryo-EM 中的影响。

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