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拟南芥 NAC 转录因子家族:结构-功能关系及 ANAC019 应激信号的决定因素。

The Arabidopsis thaliana NAC transcription factor family: structure-function relationships and determinants of ANAC019 stress signalling.

机构信息

Department of Biology, University of Copenhagen, 5 Ole Maaloesvej, Copenhagen DK-2200, Denmark.

出版信息

Biochem J. 2010 Feb 9;426(2):183-96. doi: 10.1042/BJ20091234.

Abstract

TFs (transcription factors) are modular proteins minimally containing a DBD (DNA-binding domain) and a TRD (transcription regulatory domain). NAC [for NAM (no apical meristem), ATAF, CUC (cup-shaped cotyledon)] proteins comprise one of the largest plant TF families. They are key regulators of stress perception and developmental programmes, and most share an N-terminal NAC domain. On the basis of analyses of gene expression data and the phylogeny of Arabidopsis thaliana NAC TFs we systematically decipher structural and functional specificities of the conserved NAC domains and the divergent C-termini. Nine of the ten NAC domains analysed bind a previously identified conserved DNA target sequence with a CGT[GA] core, although with different affinities. Likewise, all but one of the NAC proteins analysed is dependent on the C-terminal region for transactivational activity. In silico analyses show that the NAC TRDs contain group-specific sequence motifs and are characterized by a high degree of intrinsic disorder. Furthermore, ANAC019 was identified as a new positive regulator of ABA (abscisic acid) signalling, conferring ABA hypersensitivity when ectopically expressed in plants. Interestingly, ectopic expression of the ANAC019 DBD or TRD alone also resulted in ABA hypersensitivity. Expression of stress-responsive marker genes [COR47 (cold-responsive 47), RD29b (responsive-to-desiccation 29b) and ERD11 (early-responsive-to-dehydration 11)] were also induced by full-length and truncated ANAC019. Domain-swapping experiments were used to analyse the specificity of this function. Chimaeric proteins, where the NAC domain of ANAC019 was replaced with the analogous regions from other NAC TFs, also have the ability to positively regulate ABA signalling. In contrast, replacing the ANAC019 TRD with other TRDs abolished ANAC019-mediated ABA hypersensitivity. In conclusion, our results demonstrate that the biochemical and functional specificity of NAC TFs is associated with both the DBDs and the TRDs.

摘要

TFs(转录因子)是最小的模块化蛋白,至少包含一个 DBD(DNA 结合域)和一个 TRD(转录调控域)。NAC [NAM(无顶端分生组织)、ATAF、CUC(杯状子叶)] 蛋白是植物 TF 家族中最大的之一。它们是应激感知和发育程序的关键调节剂,大多数都共享一个 N 端 NAC 结构域。基于对基因表达数据的分析和拟南芥 NAC TF 的系统发育,我们系统地解析了保守的 NAC 结构域和分歧的 C 末端的结构和功能特异性。在分析的十个 NAC 结构域中,有九个与之前鉴定的保守 DNA 靶序列结合,其核心为 CGT[GA],尽管亲和力不同。同样,在分析的所有 NAC 蛋白中,除了一个之外,都依赖 C 末端区域进行转录激活活性。计算机分析表明,NAC TRD 包含组特异性序列基序,并且具有高度的固有无序性。此外,ANAC019 被鉴定为 ABA(脱落酸)信号的新的正调节剂,在异位表达时赋予植物 ABA 超敏性。有趣的是,单独异位表达 ANAC019 的 DBD 或 TRD 也导致 ABA 超敏性。胁迫响应标记基因 [COR47(冷响应 47)、RD29b(干燥响应 29b)和 ERD11(早期脱水响应 11)] 的表达也被全长和截断的 ANAC019 诱导。通过交换结构域实验分析了该功能的特异性。嵌合蛋白中,ANAC019 的 NAC 结构域被其他 NAC TF 的类似区域替换,也具有正向调节 ABA 信号的能力。相反,用其他 TRD 替换 ANAC019 的 TRD 会使 ANAC019 介导的 ABA 超敏性丧失。总之,我们的结果表明,NAC TF 的生化和功能特异性与 DBD 和 TRD 都有关。

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