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NMR 和 MD 研究人半乳糖凝集素-1/寡糖复合物。

NMR and MD investigations of human galectin-1/oligosaccharide complexes.

机构信息

Unité Interactions et Modulateurs de Réponses, Institut de Microbiologie de la Méditerrannée, Centre National de la Recherche Scientifique, Marseille, France.

出版信息

Biophys J. 2009 Dec 16;97(12):3168-77. doi: 10.1016/j.bpj.2009.09.026.

Abstract

The specific recognition of carbohydrates by lectins plays a major role in many cellular processes. Galectin-1 belongs to a family of 15 structurally related beta-galactoside binding proteins that are able to control a variety of cellular events, including cell cycle regulation, adhesion, proliferation, and apoptosis. The three-dimensional structure of galectin-1 has been solved by x-ray crystallography in the free form and in complex with various carbohydrate ligands. In this work, we used a combination of two-dimensional NMR titration experiments and molecular-dynamics simulations with explicit solvent to study the mode of interaction between human galectin-1 and five galactose-containing ligands. Isothermal titration calorimetry measurements were performed to determine their affinities for galectin-1. The contribution of the different hexopyranose units in the protein-carbohydrate interaction was given particular consideration. Although the galactose moiety of each oligosaccharide is necessary for binding, it is not sufficient by itself. The nature of both the reducing sugar in the disaccharide and the interglycosidic linkage play essential roles in the binding to human galectin-1.

摘要

凝集素对碳水化合物的特异性识别在许多细胞过程中起着重要作用。半乳糖凝集素-1 属于 15 种结构相关的β-半乳糖苷结合蛋白家族,能够控制多种细胞事件,包括细胞周期调控、黏附、增殖和凋亡。半乳糖凝集素-1 的三维结构已通过 X 射线晶体学在游离形式和与各种碳水化合物配体形成复合物的形式下得到解决。在这项工作中,我们使用二维 NMR 滴定实验和带有显式溶剂的分子动力学模拟的组合,研究了人半乳糖凝集素-1 与五种含半乳糖的配体之间的相互作用模式。进行等温滴定量热法测量以确定它们对半乳糖凝集素-1 的亲和力。特别考虑了在蛋白质-碳水化合物相互作用中不同己糖单元的贡献。尽管每种寡糖的半乳糖部分对于结合是必需的,但它本身并不足以保证结合。二糖中的还原糖的性质和糖苷键的性质在与人类半乳糖凝集素-1 的结合中起着至关重要的作用。

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