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Tmod: toolbox of motif discovery.
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BEST: binding-site estimation suite of tools.
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W-ChIPMotifs: a web application tool for de novo motif discovery from ChIP-based high-throughput data.
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MCAT: Motif Combining and Association Tool.
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MEET: motif elements estimation toolkit.
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rMotifGen: random motif generator for DNA and protein sequences.
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Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions.
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The value of position-specific priors in motif discovery using MEME.
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Identification of conserved drought-adaptive genes using a cross-species meta-analysis approach.
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Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments.
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MGcV: the microbial genomic context viewer for comparative genome analysis.
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PePPER: a webserver for prediction of prokaryote promoter elements and regulons.
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Mutant p53 cooperates with ETS2 to promote etoposide resistance.
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CompleteMOTIFs: DNA motif discovery platform for transcription factor binding experiments.
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本文引用的文献

1
A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length.
Bioinformatics. 2005 May 15;21(10):2240-5. doi: 10.1093/bioinformatics/bti336. Epub 2005 Feb 22.
2
BioOptimizer: a Bayesian scoring function approach to motif discovery.
Bioinformatics. 2004 Jul 10;20(10):1557-64. doi: 10.1093/bioinformatics/bth127. Epub 2004 Feb 12.
3
Finding functional sequence elements by multiple local alignment.
Nucleic Acids Res. 2004 Jan 2;32(1):189-200. doi: 10.1093/nar/gkh169. Print 2004.
5
Integrating regulatory motif discovery and genome-wide expression analysis.
Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3339-44. doi: 10.1073/pnas.0630591100. Epub 2003 Mar 7.
7
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling.
Bioinformatics. 2001 Dec;17(12):1113-22. doi: 10.1093/bioinformatics/17.12.1113.
8
An algorithm for finding signals of unknown length in DNA sequences.
Bioinformatics. 2001;17 Suppl 1:S207-14. doi: 10.1093/bioinformatics/17.suppl_1.s207.
10
Identifying DNA and protein patterns with statistically significant alignments of multiple sequences.
Bioinformatics. 1999 Jul-Aug;15(7-8):563-77. doi: 10.1093/bioinformatics/15.7.563.

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