• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

真核生物中核糖开关介导的基因表达调控。

Riboswitch-mediated control of gene expression in eukaryotes.

机构信息

Center for Plant Molecular Biology (ZMBP), Tübingen University, Tübingen, Germany.

出版信息

RNA Biol. 2010 Jan-Feb;7(1):67-76. doi: 10.4161/rna.7.1.10489. Epub 2010 Jan 1.

DOI:10.4161/rna.7.1.10489
PMID:20009507
Abstract

The discovery of metabolite-sensing RNA domains with gene regulatory functions, so-called riboswitches, has greatly expanded our view of the structural and functional complexity of RNA. Hitherto, more than 20 distinct riboswitch classes have been identified, which respond to a variety of small molecules and perform sophisticated gene regulatory tasks. Riboswitches are typically positioned in the 5' untranslated region of bacterial mRNAs, where they control gene expression by transcriptional or translational attenuation. However, the recent investigation of additional riboswitch classes has revealed a more complex repertoire of regulatory mechanisms. This also includes splicing control in filamentous fungi, green algae and higher plants by thiamin pyrophosphate-binding riboswitches, the only class of metabolite-sensing RNAs identified in eukaryotes so far. All eukaryotic riboswitches characterized to date modulate, in a first step, splicing, but the downstream processes under control vary fundamentally among different species further highlighting the versatility of this gene regulatory mechanism.

摘要

代谢物感应 RNA 结构域具有基因调控功能的发现,即所谓的核酶,极大地扩展了我们对 RNA 结构和功能复杂性的认识。迄今为止,已经确定了 20 多种不同的核酶类,它们可以响应各种小分子并执行复杂的基因调控任务。核酶通常位于细菌 mRNA 的 5'非翻译区,通过转录或翻译衰减来控制基因表达。然而,对其他核酶类的最近研究揭示了更复杂的调控机制 repertoire。这还包括硫胺素焦磷酸结合核酶对丝状真菌、绿藻和高等植物剪接的控制,这是迄今为止在真核生物中发现的唯一一类代谢物感应 RNA。迄今为止,所有被表征的真核核酶在第一步都调节剪接,但不同物种的下游过程控制存在根本差异,进一步突出了这种基因调控机制的多功能性。

相似文献

1
Riboswitch-mediated control of gene expression in eukaryotes.真核生物中核糖开关介导的基因表达调控。
RNA Biol. 2010 Jan-Feb;7(1):67-76. doi: 10.4161/rna.7.1.10489. Epub 2010 Jan 1.
2
Determination of riboswitch structures: light at the end of the tunnel?核糖开关结构的测定:隧道尽头的曙光?
RNA Biol. 2010 Jan-Feb;7(1):98-103. doi: 10.4161/rna.7.1.10756. Epub 2010 Jan 25.
3
Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs.核糖开关通过mRNA的剪接和可变3'端加工对植物基因表达进行调控。
Plant Cell. 2007 Nov;19(11):3437-50. doi: 10.1105/tpc.107.053645. Epub 2007 Nov 9.
4
Phylogenomic and comparative analysis of the distribution and regulatory patterns of TPP riboswitches in fungi.真菌中 TPP 核糖开关的分布和调控模式的系统发生基因组学和比较分析。
Sci Rep. 2018 Apr 3;8(1):5563. doi: 10.1038/s41598-018-23900-7.
5
Switching the light on plant riboswitches.开启植物核糖开关
Trends Plant Sci. 2008 Oct;13(10):526-33. doi: 10.1016/j.tplants.2008.07.004. Epub 2008 Sep 6.
6
Riboswitches: discovery of drugs that target bacterial gene-regulatory RNAs.核糖开关:靶向细菌基因调控 RNA 的药物的发现。
Acc Chem Res. 2011 Dec 20;44(12):1329-38. doi: 10.1021/ar200039b. Epub 2011 May 26.
7
Complex riboswitches.复杂核糖开关
Science. 2008 Mar 28;319(5871):1795-7. doi: 10.1126/science.1152621.
8
Comparative genomic analysis of fungal TPP-riboswitches.真菌 TPP-riboswitches 的比较基因组分析。
Fungal Genet Biol. 2018 May;114:34-41. doi: 10.1016/j.fgb.2018.03.004. Epub 2018 Mar 13.
9
Riboswitch Mechanisms: New Tricks for an Old Dog.核糖开关机制:老把戏新玩法。
Biochemistry (Mosc). 2021 Aug;86(8):962-975. doi: 10.1134/S0006297921080071.
10
A computational approach for the identification of distant homologs of bacterial riboswitches based on inverse RNA folding.基于反向 RNA 折叠的细菌核糖体开关远程同源物识别的计算方法。
Brief Bioinform. 2023 May 19;24(3). doi: 10.1093/bib/bbad110.

引用本文的文献

1
Guanidine aptamers are present in vertebrate RNAs associated with calcium signaling and neuromuscular function.胍基适配体存在于与钙信号传导和神经肌肉功能相关的脊椎动物RNA中。
Nat Commun. 2025 Aug 9;16(1):7362. doi: 10.1038/s41467-025-62815-6.
2
Rational development of FMN-based orthogonal riboswitch that functions in response to specific non-cognate ligand.基于黄素单核苷酸(FMN)的正交核糖开关的合理开发,该开关可响应特定的非同源配体发挥作用。
Nat Commun. 2025 Jul 1;16(1):5751. doi: 10.1038/s41467-025-60722-4.
3
Identification of potential riboswitch elements in Homo sapiens mRNA 5'UTR sequences using positive-unlabeled machine learning.
使用正无标记机器学习方法鉴定人类mRNA 5'非翻译区序列中的潜在核糖开关元件
PLoS One. 2025 Apr 24;20(4):e0320282. doi: 10.1371/journal.pone.0320282. eCollection 2025.
4
Structural Features of 5' Untranslated Region in Translational Control of Eukaryotes.真核生物翻译控制中5'非翻译区的结构特征
Int J Mol Sci. 2025 Feb 25;26(5):1979. doi: 10.3390/ijms26051979.
5
The Plethora of RNA-Protein Interactions Model a Basis for RNA Therapies.大量的RNA-蛋白质相互作用为RNA疗法奠定了基础。
Genes (Basel). 2025 Jan 2;16(1):48. doi: 10.3390/genes16010048.
6
Identification of potential riboswitch elements inmRNA 5'UTR sequences using Positive-Unlabeled machine learning.使用正无标记机器学习识别mRNA 5'非翻译区序列中的潜在核糖开关元件。
bioRxiv. 2024 Dec 6:2023.11.23.568398. doi: 10.1101/2023.11.23.568398.
7
A Computational Approach for Designing Synthetic Riboswitches for Next-Generation RNA Therapeutics.用于下一代 RNA 治疗的合成核糖开关设计的计算方法。
Methods Mol Biol. 2025;2847:193-204. doi: 10.1007/978-1-0716-4079-1_13.
8
FURNA: A database for functional annotations of RNA structures.FURNA:一个用于RNA结构功能注释的数据库。
PLoS Biol. 2024 Jul 29;22(7):e3002476. doi: 10.1371/journal.pbio.3002476. eCollection 2024 Jul.
9
A systematic search for RNA structural switches across the human transcriptome.在人类转录组中系统性搜索 RNA 结构开关。
Nat Methods. 2024 Sep;21(9):1634-1645. doi: 10.1038/s41592-024-02335-1. Epub 2024 Jul 16.
10
Co-transcriptional gene regulation in eukaryotes and prokaryotes.真核生物和原核生物中的共转录基因调控。
Nat Rev Mol Cell Biol. 2024 Jul;25(7):534-554. doi: 10.1038/s41580-024-00706-2. Epub 2024 Mar 20.