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光杆菌属一新种,从潮滩沉积物中分离得到的脂肪酶产生菌。

Photobacterium gaetbulicola sp. nov., a lipolytic bacterium isolated from a tidal flat sediment.

机构信息

Biotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Gijang, Busan 619-705, Republic of Korea.

Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2010 Nov;60(Pt 11):2587-2591. doi: 10.1099/ijs.0.016923-0. Epub 2009 Dec 18.

Abstract

A Gram-negative, motile, non-spore-forming and lipolytic bacterial strain, designated Gung47(T), was isolated from a tidal flat on the west coast of Korea. Strain Gung47(T) grew optimally at 30 °C and with 2-5 % (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain Gung47(T) belonged to the genus Photobacterium. Strain Gung47(T) exhibited 98.1 % 16S rRNA gene sequence similarity with Photobacterium rosenbergii LMG 22223(T) and 94.3-96.3 % similarity with other type strains of species of the genus Photobacterium. Strain Gung47(T) exhibited 47 % DNA-DNA relatedness to P. rosenbergii LMG 22223(T). Strain Gung47(T) contained Q-8 as the predominant ubiquinone and C(16 : 1)ω7c and/or iso-C(15 : 0) 2-OH, C(16 : 0) and C(18 : 1)ω7c as the major fatty acids. In this study, two closely related type strains, P. rosenbergii LMG 22223(T) and Photobacterium halotolerans LMG 22194(T), were also found to have Q-8 as the predominant ubiquinone. The DNA G+C content of strain Gung47(T) was 50.6 mol%. The differential phenotypic properties together with the phylogenetic and genetic distinctiveness of strain Gung47(T) demonstrated that this strain is distinguishable from recognized Photobacterium species. Therefore, strain Gung47(T) is considered to represent a novel species of the genus Photobacterium, for which the name Photobacterium gaetbulicola sp. nov. is proposed. The type strain is Gung47(T) (=KCTC 22804(T) =CCUG 58399(T)).

摘要

一株革兰氏阴性、运动、非孢子形成和脂解细菌菌株,命名为 Gung47(T),从韩国西海岸的一个潮滩中分离得到。菌株 Gung47(T) 在 30°C 和 2-5%(w/v)NaCl 下生长最佳。基于 16S rRNA 基因序列的系统发育分析表明,菌株 Gung47(T) 属于发光杆菌属。菌株 Gung47(T) 与 Photobacterium rosenbergii LMG 22223(T) 的 16S rRNA 基因序列相似性为 98.1%,与其他 Photobacterium 属种的模式菌株的相似性为 94.3-96.3%。菌株 Gung47(T) 与 Photobacterium rosenbergii LMG 22223(T) 的 DNA-DNA 同源性为 47%。菌株 Gung47(T) 含有 Q-8 作为主要的泛醌,C(16:1)ω7c 和/或 iso-C(15:0)2-OH、C(16:0)和 C(18:1)ω7c 作为主要的脂肪酸。在本研究中,还发现两个密切相关的模式菌株,Photobacterium halotolerans LMG 22194(T) 和 Photobacterium rosenbergii LMG 22223(T),也含有 Q-8 作为主要的泛醌。菌株 Gung47(T) 的 DNA G+C 含量为 50.6 mol%。菌株 Gung47(T) 的表型差异特征以及与已识别的发光杆菌属物种的系统发育和遗传差异表明,该菌株与公认的 Photobacterium 种不同。因此,菌株 Gung47(T) 被认为代表了发光杆菌属的一个新种,建议将其命名为 Photobacterium gaetbulicola sp. nov.。其模式菌株为 Gung47(T)=KCTC 22804(T)=CCUG 58399(T)。

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