Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yuseong, Daejeon, South Korea.
Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, South Korea.
Int J Syst Evol Microbiol. 2012 May;62(Pt 5):1027-1031. doi: 10.1099/ijs.0.033399-0. Epub 2011 Jun 17.
A Gram-stain-negative, aerobic, non-flagellated, non-gliding and short rod- or rod-shaped bacterial strain, designated BB-My20(T), was isolated from tidal flat sediment taken from the southern coast of Korea. Strain BB-My20(T) grew optimally at 37 °C, at pH 7.0-7.5 and in the presence of 2 % (w/v) NaCl. A phylogenetic tree based on 16S rRNA gene sequences showed that strain BB-My20(T) fell within the clade comprising Salinimicrobium species, joining Salinimicrobium catena HY1(T), with which it had a 16S rRNA gene sequence similarity value of 97.4 %. It exhibited 95.4-96.9 % sequence similarity to the type strains of other members of the genus Salinimicrobium. Strain BB-My20(T) contained MK-6 as the predominant menaquinone and iso-C(15 : 0), anteiso-C(15 : 0) and iso-C(17 : 0) 3-OH as the major fatty acids. The major polar lipids detected in strain BB-My20(T) and S. catena JCM 14015(T) were phosphatidylethanolamine and one unidentified lipid. The DNA G+C content of strain BB-My20(T) was 45.1 mol% and its mean DNA-DNA relatedness value with S. catena JCM 14015(T) was 4.5 %. Differential phenotypic properties, together with its phylogenetic and genetic distinctiveness, revealed that strain BB-My20(T) can be distinguished from the four recognized species of the genus Salinimicrobium. On the basis of the data presented, strain BB-My20(T) is considered to represent a novel species of the genus Salinimicrobium, for which the name Salinimicrobium gaetbulicola sp. nov. is proposed; the type strain is BB-My20(T) ( = KCTC 23579(T) = CCUG 60898(T)).
一株革兰氏阴性、需氧、无鞭毛、不滑行、短杆状或杆状的细菌菌株,被命名为 BB-My20(T),从韩国南部海岸的潮滩沉积物中分离得到。菌株 BB-My20(T) 在 37°C、pH7.0-7.5 和 2%(w/v)NaCl 的条件下生长最佳。基于 16S rRNA 基因序列的系统发育树显示,菌株 BB-My20(T) 属于 Salinimicrobium 种的分支,与 Salinimicrobium catena HY1(T) 聚在一起,与后者的 16S rRNA 基因序列相似度值为 97.4%。它与属内其他种的模式菌株的序列相似度为 95.4-96.9%。菌株 BB-My20(T) 含有 MK-6 作为主要的menaquinone,以及 iso-C(15 : 0)、anteiso-C(15 : 0) 和 iso-C(17 : 0) 3-OH 作为主要的脂肪酸。在菌株 BB-My20(T) 和 S. catena JCM 14015(T) 中检测到的主要极性脂质是磷脂酰乙醇胺和一种未鉴定的脂质。菌株 BB-My20(T) 的 DNA G+C 含量为 45.1 mol%,与 S. catena JCM 14015(T) 的平均 DNA-DNA 同源性值为 4.5%。差异表型特性,加上其系统发育和遗传独特性,表明菌株 BB-My20(T) 可以与属内的四个已识别种区分开来。基于所提供的数据,菌株 BB-My20(T) 被认为代表了 Salinimicrobium 属的一个新种,建议将其命名为 Salinimicrobium gaetbulicola sp. nov.;其模式菌株为 BB-My20(T)(=KCTC 23579(T)=CCUG 60898(T))。