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将组装成鞘的 Leptothrix cholodnii 糖缀合物的增溶和结构测定。

Solubilization and structural determination of a glycoconjugate which is assembled into the sheath of Leptothrix cholodnii.

机构信息

Division of Materials Science and Chemical Engineering, Graduate School of Engineering, Yokohama National University, 79-5 Tokiwadai, Hodogaya, Yokohama 240-8501, Japan.

出版信息

Int J Biol Macromol. 2010 Mar 1;46(2):206-11. doi: 10.1016/j.ijbiomac.2009.12.006. Epub 2009 Dec 22.

Abstract

The sheath of Leptothrix cholodnii is constructed from a structural glycoconjugate, a straight-chained amphoteric heteropolysaccharide modified with glycine and cysteine. Though the structure of the glycan core is already determined, its modifications with amino acids and other molecules are not fully resolved. In this study, we aimed to determine the chemical structure of the glycoconjugate as a whole. Enantiomeric determination of cysteine in the sheath was performed and as a result, L-cysteine was detected. NMR spectroscopy was endeavored to determine overall structure of the glycoconjugate. Prior to NMR analysis, solubilization of the glycoconjugate was attempted by adding denaturing reagents or by derivatization. As far as tested, sulfonation by performic acid oxidation was suitable for solubilization, but further improvement was achieved by N-acetylation. The approximate molecular weight of the derivative was estimated to be 4.5 x 10(4) by size-exclusion chromatography. The NMR studies for the sulfonated glycoconjugate and its N-acetylated derivative revealed that the sheath glycoconjugate is a glycosaminoglycan consisting of a pentasaccharide repeating unit which is substoichiometrically esterified with 3-hydroxypropionic acid and stoichiometrically amidated with acetic acid and glycyl-L-cysteine.

摘要

鞘状聚丝菌的鞘由结构糖缀合物组成,这是一种直链两性杂多糖,经过甘氨酸和半胱氨酸修饰。尽管糖的核心结构已经确定,但它与氨基酸和其他分子的修饰尚未完全解决。在这项研究中,我们旨在确定整个糖缀合物的化学结构。对鞘中的半胱氨酸进行对映异构体测定,结果检测到 L-半胱氨酸。核磁共振波谱法被用于确定糖缀合物的整体结构。在进行 NMR 分析之前,通过添加变性试剂或衍生化来尝试溶解糖缀合物。在测试过的方法中,过甲酸氧化磺化适合于溶解,但通过 N-乙酰化进一步得到了改进。通过尺寸排阻色谱法估计衍生物的近似分子量为 4.5 x 10(4)。对磺化糖缀合物及其 N-乙酰化衍生物的 NMR 研究表明,鞘糖缀合物是一种糖胺聚糖,由五糖重复单元组成,该重复单元与 3-羟基丙酸以亚化学计量酯化,并与乙酸和甘氨酰-L-半胱氨酸以化学计量酰胺化。

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