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半乳糖氧化酶1.7埃晶体结构揭示的新型硫醚键

Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase.

作者信息

Ito N, Phillips S E, Stevens C, Ogel Z B, McPherson M J, Keen J N, Yadav K D, Knowles P F

机构信息

Department of Biochemistry and Molecular Biology, University of Leeds, UK.

出版信息

Nature. 1991 Mar 7;350(6313):87-90. doi: 10.1038/350087a0.

DOI:10.1038/350087a0
PMID:2002850
Abstract

Galactose oxidase is an extracellular enzyme secreted by the fungus Dactylium dendroides. It is monomeric, with a relative molecular mass of 68,000, catalyses the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalysing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. Recent evidence arguing against a Cu(III)-Cu(I) couple implies the existence of a second redox-active site proposed to involve pyrroloquinoline quinone or a tyrosine radical. We now report the crystal structure of galactose oxidase at 1.7 A resolution. This reveals a unique structural feature at the copper site with a novel thioether bond linking Cys 228 and Tyr 272 in a stacking interaction with Trp 290. We propose that these molecular components stabilize the protein free-radical species essential for catalysis and thus provide a 'built-in' secondary cofactor. This feature may represent a new mechanism for mediating electron transfer in metalloenzymes in the absence of exogenous cofactors.

摘要

半乳糖氧化酶是一种由树状指孢囊菌分泌的胞外酶。它是单体,相对分子质量为68,000,催化多种伯醇底物的立体特异性氧化,并且拥有一个独特的单核铜位点,该位点对于在伯醇氧化为相应醛的过程中催化双电子转移反应至关重要。最近有证据反对Cu(III)-Cu(I)偶联,这意味着存在第二个氧化还原活性位点,该位点被认为涉及吡咯喹啉醌或酪氨酸自由基。我们现在报道了分辨率为1.7埃的半乳糖氧化酶晶体结构。这揭示了铜位点处的一个独特结构特征,即通过一个新的硫醚键将半胱氨酸228和酪氨酸272连接起来,与色氨酸290形成堆积相互作用。我们提出这些分子组分稳定了催化所必需的蛋白质自由基物种,从而提供了一个“内置”的辅助因子。这一特征可能代表了在没有外源辅助因子的情况下金属酶中介导电子转移的一种新机制。

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Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase.半乳糖氧化酶1.7埃晶体结构揭示的新型硫醚键
Nature. 1991 Mar 7;350(6313):87-90. doi: 10.1038/350087a0.
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Three-dimensional structure of galactose oxidase: an enzyme with a built-in secondary cofactor.半乳糖氧化酶的三维结构:一种内置二级辅因子的酶。
Faraday Discuss. 1992(93):75-84. doi: 10.1039/fd9929300075.
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The radical chemistry of galactose oxidase.半乳糖氧化酶的自由基化学
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Formation of Monofluorinated Radical Cofactor in Galactose Oxidase through Copper-Mediated C-F Bond Scission.通过铜介导的 C-F 键断裂在半乳糖氧化酶中形成单氟化自由基辅因子。
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Kinetic isotope effects as probes of the mechanism of galactose oxidase.动力学同位素效应作为半乳糖氧化酶作用机制的探针
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Tyrosine or Tryptophan? Modifying a Metalloradical Catalytic Site by Removal of the Cys-Tyr Cross-Link in the Galactose 6-Oxidase Homologue GlxA.酪氨酸还是色氨酸?通过去除半乳糖 6-氧化酶同源物 GlxA 中的 Cys-Tyr 交联来修饰金属自由基催化位点。
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Construction and analysis of a semi-quantitative energy profile for the reaction catalyzed by the radical enzyme galactose oxidase.对自由基酶半乳糖氧化酶催化反应的半定量能量分布进行构建与分析。
Biochim Biophys Acta. 1998 Apr 23;1384(1):43-54. doi: 10.1016/s0167-4838(97)00209-4.
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Crystal structure of the precursor of galactose oxidase: an unusual self-processing enzyme.半乳糖氧化酶前体的晶体结构:一种独特的自我加工酶。
Proc Natl Acad Sci U S A. 2001 Nov 6;98(23):12932-7. doi: 10.1073/pnas.231463798.
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Thiols as mechanistic probes for catalysis by the free radical enzyme galactose oxidase.硫醇作为自由基酶半乳糖氧化酶催化作用的机制探针。
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Combinatorial approaches to functional models for galactose oxidase.半乳糖氧化酶功能模型的组合方法。
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