Departments of Mathematics and Physics, University of California, Berkeley, 94720, USA.
Bull Math Biol. 2010 Feb;72(2):359-74. doi: 10.1007/s11538-009-9450-6. Epub 2009 Dec 30.
Carcinogenesis and cancer progression are often modeled using population dynamics equations for a diverse somatic cell population undergoing mutations or other alterations that alter the fitness of a cell and its progeny. Usually it is then assumed, paralleling standard mathematical approaches to evolution, that such alterations are slow compared to selection, i.e., compared to subpopulation frequency changes induced by unequal subpopulation proliferation rates. However, the alterations can be rapid in some cases. For example, results in our lab on in vitro analogues of transformation and progression in carcinogenesis suggest there could be periods where rapid alterations triggered by horizontal intercellular transfer of genetic material occur and quickly result in marked changes of cell population structure.We here initiate a mathematical study of situations where alterations are rapid compared to selection. A classic selection-mutation formalism is generalized to obtain a "proliferation-alteration" system of ordinary differential equations, which we analyze using a rapid-alteration approximation. A system-theoretical estimate of the total-population net growth rate emerges. This rate characterizes the diverse, interacting cell population acting as a single system; it is a weighted average of subpopulation rates, the weights being components of the Perron-Frobenius eigenvector for an ergodic Markov-process matrix that describes alterations by themselves. We give a detailed numerical example to illustrate the rapid-alteration approximation, suggest a possible interpretation of the fact that average aneuploidy during cancer progression often appears to be comparatively stable in time, and briefly discuss possible generalizations as well as weaknesses of our approach.
癌症的发生和发展通常采用群体动力学方程来模拟,这些方程适用于发生突变或其他改变的异质性体细胞群体,这些改变会改变细胞及其后代的适应性。通常假设,与进化的标准数学方法平行,与选择相比,这种改变是缓慢的,即与由亚群增殖率不等引起的亚群频率变化相比是缓慢的。然而,在某些情况下,这种改变可能很快。例如,我们实验室在癌症发生转化和进展的体外模拟结果表明,在某些情况下,可能会有快速改变的时期,这些改变是由遗传物质的水平细胞间转移引发的,并迅速导致细胞群体结构的显著变化。在这里,我们开始研究与选择相比改变迅速的情况。经典的选择-突变形式主义被推广以获得一个“增殖-改变”常微分方程组,我们使用快速改变近似来分析这个方程组。出现了一个关于总体净增长率的系统理论估计。这个增长率是作为一个单一系统的异质相互作用细胞群体的特征;它是亚群率的加权平均值,权重是描述自身改变的遍历马尔可夫过程矩阵的特征向量的分量。我们给出了一个详细的数值例子来说明快速改变近似,提出了癌症进展过程中平均非整倍体经常看起来相对稳定的时间的可能解释,并简要讨论了我们方法的可能推广和弱点。