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链霉菌来源的磷脂酰肌醇特异性磷脂酶 C 的独特催化机制。

Unique catalytic mechanism of phosphatidylinositol-specific phospholipase C from Streptomyces antibioticus.

机构信息

Department of Medicinal Chemistry and Pharmacognosy, The University of Illinois at Chicago, Chicago, Illinois 60612, USA.

出版信息

J Am Chem Soc. 2010 Feb 3;132(4):1210-1. doi: 10.1021/ja908285h.

Abstract

Calcium-dependent phosphatidylinositol-specific phospholipase C from Streptomyces antibioticus (saPLC1) catalyzes hydrolysis of phosphatidylinositol (PI) into inositol 1-phosphate by a unique mechanism involving formation of inositol 1,6-cyclic phosphate (1,6-IcP) as an intermediate. This work examines the rates and products of cleavage of phosphorothioate and phosphorodithioate analogues of PI in which sulfur was introduced into the phosphate moiety at a nonbridging position (pro-R or pro-S), a bridging position, or both. The replacement of the pro-S oxygen in the phosphoryl moiety of PI by sulfur results in a 3 x 10(7)-fold decrease of the catalytic rate constant, whereas alteration of the pro-R oxygen results in only a modest rate reduction. The addition of the second sulfur atom into the bridging position of the S(p) isomer of the phosphorothioate analogue causes a dramatic (2 x 10(5)-fold) increase of the rate of cleavage but has a negligible effect on the R(p) isomer. These differences are consistent with a change in the mechanism for the S(p) isomer of the phosphorodithioate analogue into a more dissociative type, where the leaving group carries a large amount of negative charge. In addition, hydrolysis of the diastereomers of the phosphorothioate analogues of 1,6-IcP, inositol cis-1,6-IcPs and inositol trans-1,6-IcPs, affords two distinct products, inositol 1-phosphorothioate and inositol 6-phosphorothioate, respectively. Formation of inositol 6-phosphorothioate is explained by the binding of trans-1,6-IcPs in the active site in a rotated orientation that interchanges the oxygen atoms at the 1- and 6-positions, thereby allowing the hydroxyl group at the 1-position to act as a leaving group. The reorientation of the intermediate is driven by formation of favorable interactions of the enzyme active site with the nonbridging oxygen in the trans intermediate.

摘要

链霉菌属抗生素(saPLC1)来源的钙依赖磷脂酰肌醇特异性磷脂酶 C 通过独特的机制催化磷脂酰肌醇(PI)水解生成肌醇 1-磷酸,该机制涉及到形成肌醇 1,6-环磷酸(1,6-IcP)作为中间产物。本工作研究了在磷酸部分非桥接位置(pro-R 或 pro-S)、桥接位置或两者都引入硫原子的 PI 的硫代磷酸酯和二硫代磷酸酯类似物的裂解速率和产物。在 PI 的磷酸部分的磷酰基中用硫取代 pro-S 氧导致催化速率常数降低 3 x 10(7)倍,而改变 pro-R 氧仅导致适度的速率降低。在硫代磷酸酯类似物的 S(p)异构体的桥接位置添加第二个硫原子会导致裂解速率急剧增加(2 x 10(5)倍),但对 R(p)异构体几乎没有影响。这些差异与 S(p)异构体的磷硫代二酸盐类似物的机制变化一致,这种变化转化为更具解离型的机制,其中离去基团带有大量负电荷。此外,1,6-IcP 的磷硫代酸酯类似物的非对映异构体的水解生成两种不同的产物,分别为肌醇 1-磷酸硫代酯和肌醇 6-磷酸硫代酯。肌醇 6-磷酸硫代酯的形成是通过将 trans-1,6-IcPs 以旋转取向结合到活性部位来解释的,这种旋转取向使 1-位和 6-位的氧原子相互交换,从而使 1-位的羟基可作为离去基团。中间体的重定向是由酶活性位点与 trans 中间体的非桥接氧形成有利相互作用驱动的。

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