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药物诱导的DNA修复:DNA-双特卡林复合物的X射线结构

Drug-induced DNA repair: X-ray structure of a DNA-ditercalinium complex.

作者信息

Gao Q, Williams L D, Egli M, Rabinovich D, Chen S L, Quigley G J, Rich A

机构信息

Department of Biology, Massachusetts Institute of Technology, Cambridge 02139.

出版信息

Proc Natl Acad Sci U S A. 1991 Mar 15;88(6):2422-6. doi: 10.1073/pnas.88.6.2422.

DOI:10.1073/pnas.88.6.2422
PMID:2006181
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC51244/
Abstract

Ditercalinium is a synthetic anticancer drug that binds to DNA by bis-intercalation and activates DNA repair processes. In prokaryotes, noncovalent DNA-ditercalinium complexes are incorrectly recognized by the uvrABC repair system as covalent lesions on DNA. In eukaryotes, mitochondrial DNA is degraded by excess and futile DNA repair. Using x-ray crystallography, we have determined, to 1.7 A resolution, the three-dimensional structure of a complex of ditercalinium bound to the double-stranded DNA fragment [d(CGCG)]2. The DNA in the complex with ditercalinium is kinked (by 15 degrees) and severely unwound (by 36 degrees) with exceptionally wide major and minor grooves. Recognition of the DNA-ditercalinium complex by uvrABC in prokaryotes, and by mitochondrial DNA repair systems in eukaryotes, might be related to drug-induced distortion of the DNA helix.

摘要

地特卡林是一种合成抗癌药物,它通过双插入作用与DNA结合并激活DNA修复过程。在原核生物中,uvrABC修复系统会将非共价的DNA-地特卡林复合物错误地识别为DNA上的共价损伤。在真核生物中,线粒体DNA会因过量且无效的DNA修复而降解。利用X射线晶体学,我们已将地特卡林与双链DNA片段[d(CGCG)]2形成的复合物的三维结构解析到1.7埃的分辨率。与地特卡林形成复合物的DNA发生了扭结(15度)并严重解旋(36度),其大沟和小沟异常宽阔。原核生物中的uvrABC以及真核生物中的线粒体DNA修复系统对DNA-地特卡林复合物的识别,可能与药物诱导的DNA螺旋扭曲有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af65/51244/f48f50654501/pnas01056-0399-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af65/51244/c8636b476415/pnas01056-0397-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af65/51244/8aa892b704ea/pnas01056-0398-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af65/51244/f48f50654501/pnas01056-0399-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af65/51244/c8636b476415/pnas01056-0397-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af65/51244/8aa892b704ea/pnas01056-0398-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af65/51244/f48f50654501/pnas01056-0399-a.jpg

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J Med Chem. 1980 Dec;23(12):1336-43. doi: 10.1021/jm00186a010.
2
1H NMR study of the structure of a pyridocarbazole dimer-d[CpGpCpG] complex.吡啶并咔唑二聚体 - d[CpGpCpG] 复合物结构的¹H NMR研究
Biochimie. 1985 Jul-Aug;67(7-8):823-8. doi: 10.1016/s0300-9084(85)80174-7.
3
The dependence of the surface electrostatic potential of B-DNA on environmental factors.
茚并[1,2-b]喹啉-9,11-二酮作为细胞毒性剂的分子模拟
Iran J Pharm Res. 2018 Fall;17(4):1249-1262.
4
Recent Advances in Developing Small Molecules Targeting Nucleic Acid.靶向核酸小分子研发的最新进展
Int J Mol Sci. 2016 May 30;17(6):779. doi: 10.3390/ijms17060779.
5
The impact of DNA intercalators on DNA and DNA-processing enzymes elucidated through force-dependent binding kinetics.通过力依赖性结合动力学阐明DNA嵌入剂对DNA和DNA加工酶的影响。
Nat Commun. 2015 Jun 18;6:7304. doi: 10.1038/ncomms8304.
6
DNA Recognition by a Novel Bis-Intercalator, Potent Anticancer Drug XR5944.新型双嵌入剂、强效抗癌药物XR5944对DNA的识别
Curr Top Med Chem. 2015;15(14):1385-97. doi: 10.2174/1568026615666150413155608.
7
Structure-based DNA-targeting strategies with small molecule ligands for drug discovery.基于结构的小分子配体 DNA 靶向策略及其在药物发现中的应用。
Med Res Rev. 2013 Sep;33(5):1119-73. doi: 10.1002/med.21278. Epub 2013 Apr 30.
8
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9
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Nucleic Acids Res. 2006;34(22):6663-72. doi: 10.1093/nar/gkl930. Epub 2006 Dec 1.
10
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Biophys J. 2003 Jun;84(6):3838-47. doi: 10.1016/S0006-3495(03)75111-X.
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4
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6
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9
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10
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