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结构域交换诱导细菌双精氨酸易位校正伴侣的内在 GTP 酶活性。

Intrinsic GTPase activity of a bacterial twin-arginine translocation proofreading chaperone induced by domain swapping.

机构信息

College of Life Sciences, University of Dundee, Dundee, UK.

出版信息

FEBS J. 2010 Jan;277(2):511-25. doi: 10.1111/j.1742-4658.2009.07507.x.

DOI:10.1111/j.1742-4658.2009.07507.x
PMID:20064164
Abstract

The bacterial twin-arginine translocation (Tat) system is a protein targeting pathway dedicated to the transport of folded proteins across the cytoplasmic membrane. Proteins transported on the Tat pathway are synthesised as precursors with N-terminal signal peptides containing a conserved amino acid motif. In Escherichia coli, many Tat substrates contain prosthetic groups and undergo cytoplasmic assembly processes prior to the translocation event. A pre-export 'Tat proofreading' process, mediated by signal peptide-binding chaperones, is considered to prevent premature export of some Tat-targeted proteins until all other assembly processes are complete. TorD is a paradigm Tat proofreading chaperone and co-ordinates the maturation and export of the periplasmic respiratory enzyme trimethylamine N-oxide reductase (TorA). Although it is well established that TorD binds directly to the TorA signal peptide, the mechanism of regulation or control of binding is not understood. Previous structural analyses of TorD homologues showed that these proteins can exist as monomeric and domain-swapped dimeric forms. In the present study, we demonstrate that isolated recombinant TorD exhibits a magnesium-dependent GTP hydrolytic activity, despite the absence of classical nucleotide-binding motifs in the protein. TorD GTPase activity is shown to be present only in the domain-swapped homodimeric form of the protein, thus defining a biochemical role for the oligomerisation. Site-directed mutagenesis identified one TorD side-chain (D68) that was important in substrate selectivity. A D68W variant TorD protein was found to exhibit an ATPase activity not observed for native TorD, and an in vivo assay established that this variant was defective in the Tat proofreading process.

摘要

细菌双精氨酸转运 (Tat) 系统是一种专门用于跨细胞质膜转运折叠蛋白的蛋白质靶向途径。通过 Tat 途径转运的蛋白质作为前体合成,其 N 端信号肽含有保守的氨基酸模体。在大肠杆菌中,许多 Tat 底物含有辅基,并在易位事件之前经历细胞质组装过程。一个预出口的“Tat 校对”过程,由信号肽结合伴侣介导,被认为可以防止一些 Tat 靶向蛋白过早输出,直到所有其他组装过程完成。TorD 是一种典范的 Tat 校对伴侣,协调周质呼吸酶三甲基胺 N-氧化物还原酶 (TorA) 的成熟和输出。尽管已经证实 TorD 直接结合 TorA 信号肽,但结合的调节或控制机制尚不清楚。先前对 TorD 同源物的结构分析表明,这些蛋白质可以以单体和结构域交换的二聚体形式存在。在本研究中,我们证明分离的重组 TorD 表现出依赖镁的 GTP 水解活性,尽管该蛋白中不存在经典的核苷酸结合基序。TorD GTP 酶活性仅存在于该蛋白的结构域交换同源二聚体形式中,从而为寡聚化定义了一个生化作用。定点突变鉴定了一个 TorD 侧链 (D68),它对底物选择性很重要。发现 D68W 变体 TorD 蛋白表现出未观察到的 ATPase 活性,体内测定建立了该变体在 Tat 校对过程中存在缺陷。

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