Suppr超能文献

2008 年中国大陆输入性基孔肯雅热病毒的基因分析。

Genetic analysis of chikungunya viruses imported to mainland China in 2008.

机构信息

State Key Laboratory for Molecular Virology and Genetic Engineering, Institute for Viral Disease Control and Prevention, China CDC, 100 Yingxinjie, Xuanwu District, Beijing 100052, China.

出版信息

Virol J. 2010 Jan 18;7:8. doi: 10.1186/1743-422X-7-8.

Abstract

BACKGROUND

Chikungunya virus (CHIKV) has caused large outbreaks worldwide in recent years, especially on the islands of the Indian Ocean and India. The virus is transmitted by mosquitoes (Aedes aegypti), which are widespread in China, with an especially high population density in southern China. Analyses of full-length viral sequences revealed the acquisition of a single adaptive mutation providing a selective advantage for the transmission of CHIKV by this species. No outbreaks due to the local transmission of CHIKV have been reported in China, and no cases of importation were detected on mainland China before 2008. We followed the spread of imported CHIKV in southern China and analyzed the genetic character of the detected viruses to evaluate their potential for evolution.

RESULTS

The importation of CHIKV to mainland China was first detected in 2008. The genomic sequences of four of the imported viruses were identified, and phylogenetic analysis demonstrated that the sequences were clustered in the Indian Ocean group; however, seven amino acid changes were detected in the nonstructural protein-coding region, and five amino acid changes were noted in the structural protein-coding regions. In particular, a novel substitution in E2 was detected (K252Q), which may impact the neurovirulence of CHIKV. The adaptive mutation A226V in E1 was observed in two imported cases of chikungunya disease.

CONCLUSIONS

Laboratory-confirmed CHIKV infections among travelers visiting China in 2008 were presented, new mutations in the viral nucleic acids and proteins may represent adaptive mutations for human or mosquito hosts.

摘要

背景

基孔肯雅热病毒(CHIKV)近年来在全球范围内引发了大规模疫情,尤其是在印度洋岛屿和印度。该病毒通过蚊子(埃及伊蚊)传播,中国广泛存在这种蚊子,尤其是在中国南方,其种群密度很高。对全长病毒序列的分析显示,病毒获得了一个单一的适应性突变,这为该物种传播 CHIKV 提供了选择优势。中国尚未报告因本地传播 CHIKV 引起的疫情,在 2008 年之前,中国大陆也未检测到输入性病例。我们对中国南方输入性 CHIKV 的传播进行了跟踪,并分析了检测到的病毒的遗传特征,以评估其进化潜力。

结果

CHIKV 于 2008 年首次传入中国大陆。鉴定了 4 株输入性病毒的基因组序列,系统进化分析表明序列聚类在印度洋群内;然而,在非结构蛋白编码区检测到 7 个氨基酸的变化,在结构蛋白编码区检测到 5 个氨基酸的变化。特别是,在 E2 中检测到一个新的取代(K252Q),这可能影响 CHIKV 的神经毒力。在 2 例输入性基孔肯雅热病例中观察到 E1 中的适应性突变 A226V。

结论

呈现了旅行者在 2008 年访问中国时确诊的实验室确认的 CHIKV 感染病例,病毒核酸和蛋白中的新突变可能代表了对人类或蚊子宿主的适应性突变。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9cdb/2831882/f8b4cea41006/1743-422X-7-8-1.jpg

相似文献

1
Genetic analysis of chikungunya viruses imported to mainland China in 2008.
Virol J. 2010 Jan 18;7:8. doi: 10.1186/1743-422X-7-8.
4
Chikungunya virus and the mosquito vector Aedes aegypti in New Caledonia (South Pacific Region).
Vector Borne Zoonotic Dis. 2012 Dec;12(12):1036-41. doi: 10.1089/vbz.2011.0937. Epub 2012 Nov 20.
5
Chikungunya emergency in China: microevolution and genetic analysis for a local outbreak.
Virus Genes. 2014 Feb;48(1):15-22. doi: 10.1007/s11262-013-0991-2. Epub 2013 Oct 29.
6
Molecular investigations of chikungunya virus during outbreaks in Orissa, Eastern India in 2010.
Infect Genet Evol. 2012 Jul;12(5):1094-101. doi: 10.1016/j.meegid.2012.03.012. Epub 2012 Mar 29.
8
[Analysis on the epidemiology and etiology characteristics of first imported Chikungunya fever case in Henan Province in 2017].
Zhonghua Yu Fang Yi Xue Za Zhi. 2019 Apr 6;53(4):415-418. doi: 10.3760/cma.j.issn.0253-9624.2019.04.017.
10
Clinical and virological characterization of imported cases of Chikungunya fever.
Wien Klin Wochenschr. 2008;120(19-20 Suppl 4):95-100. doi: 10.1007/s00508-008-1035-0.

引用本文的文献

1
Host-adaptive mutations in Chikungunya virus genome.
Virulence. 2024 Dec;15(1):2401985. doi: 10.1080/21505594.2024.2401985. Epub 2024 Sep 12.
3
Chikungunya Fever Outbreak, Zhejiang Province, China, 2017.
Emerg Infect Dis. 2019 Aug;25(8):1589-1591. doi: 10.3201/eid2508.181212.
6
Mosquito-Associated Viruses in China.
Virol Sin. 2018 Feb;33(1):5-20. doi: 10.1007/s12250-018-0002-9. Epub 2018 Mar 12.
7
Development of Neutralization Assay Using an eGFP Chikungunya Virus.
Viruses. 2016 Jun 28;8(7):181. doi: 10.3390/v8070181.
8
Chikungunya vaccines in development.
Hum Vaccin Immunother. 2016 Mar 3;12(3):716-31. doi: 10.1080/21645515.2015.1101197.
10
Chikungunya emergency in China: microevolution and genetic analysis for a local outbreak.
Virus Genes. 2014 Feb;48(1):15-22. doi: 10.1007/s11262-013-0991-2. Epub 2013 Oct 29.

本文引用的文献

1
Chikungunya virus of Asian and Central/East African genotypes in Malaysia.
J Clin Virol. 2009 Oct;46(2):180-3. doi: 10.1016/j.jcv.2009.07.016. Epub 2009 Aug 14.
2
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
Mol Biol Evol. 2007 Aug;24(8):1596-9. doi: 10.1093/molbev/msm092. Epub 2007 May 7.
3
Reemergence of endemic Chikungunya, Malaysia.
Emerg Infect Dis. 2007 Jan;13(1):147-9. doi: 10.3201/eid1301.060617.
4
Chikungunya outbreaks caused by African genotype, India.
Emerg Infect Dis. 2006 Oct;12(10):1580-3. doi: 10.3201/eid1210.060529.
5
Chikungunya re-emergence: possible mechanisms.
Lancet. 2006 Sep 9;368(9539):918. doi: 10.1016/S0140-6736(06)69370-7.
6
How did chikungunya reach the Indian Ocean?
Lancet Infect Dis. 2006 Sep;6(9):543. doi: 10.1016/s1473-3099(06)70559-x.
7
Genome microevolution of chikungunya viruses causing the Indian Ocean outbreak.
PLoS Med. 2006 Jul;3(7):e263. doi: 10.1371/journal.pmed.0030263. Epub 2006 May 23.
8
Identification of adult mouse neurovirulence determinants of the Sindbis virus strain AR86.
J Virol. 2005 Apr;79(7):4219-28. doi: 10.1128/JVI.79.7.4219-4228.2005.
9
Prospects for inferring very large phylogenies by using the neighbor-joining method.
Proc Natl Acad Sci U S A. 2004 Jul 27;101(30):11030-5. doi: 10.1073/pnas.0404206101. Epub 2004 Jul 16.
10
A ligand-binding pocket in the dengue virus envelope glycoprotein.
Proc Natl Acad Sci U S A. 2003 Jun 10;100(12):6986-91. doi: 10.1073/pnas.0832193100. Epub 2003 May 20.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验