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植物非生物胁迫响应中调控网络的“组学”分析。

'Omics' analyses of regulatory networks in plant abiotic stress responses.

机构信息

Gene Discovery Research Team, RIKEN Plant Science Center, Tsukuba, Ibaraki, Japan.

出版信息

Curr Opin Plant Biol. 2010 Apr;13(2):132-8. doi: 10.1016/j.pbi.2009.12.006. Epub 2010 Jan 14.

Abstract

Plants must respond and adapt to abiotic stresses to survive in various environmental conditions. Plants have acquired various stress tolerance mechanisms, which are different processes involving physiological and biochemical changes that result in adaptive or morphological changes. Recent advances in genome-wide analyses have revealed complex regulatory networks that control global gene expression, protein modification, and metabolite composition. Genetic regulation and epigenetic regulation, including changes in nucleosome distribution, histone modification, DNA methylation, and npcRNAs (non-protein-coding RNA) play important roles in abiotic stress gene networks. Transcriptomics, metabolomics, bioinformatics, and high-through-put DNA sequencing have enabled active analyses of regulatory networks that control abiotic stress responses. Such analyses have markedly increased our understanding of global plant systems in responses and adaptation to stress conditions.

摘要

植物必须对非生物胁迫做出响应和适应,才能在各种环境条件下生存。植物已经获得了各种耐受胁迫的机制,这些机制是不同的过程,涉及到生理和生化变化,导致适应性或形态变化。最近在全基因组分析方面的进展揭示了控制全局基因表达、蛋白质修饰和代谢物组成的复杂调控网络。遗传调控和表观遗传调控,包括核小体分布、组蛋白修饰、DNA 甲基化和非编码 RNA(npcRNA)的变化,在非生物胁迫基因网络中发挥重要作用。转录组学、代谢组学、生物信息学和高通量 DNA 测序使调控网络的主动分析成为可能,这些分析极大地提高了我们对植物系统在应对和适应胁迫条件下的全局理解。

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