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固态 NMR 研究 HIV-1 衣壳蛋白组装。

Solid-state NMR studies of HIV-1 capsid protein assemblies.

机构信息

Pittsburgh Center for HIV Protein Interactions, University of Pittsburgh School of Medicine, 1051 Biomedical Science Tower 3, 3501 Fifth Avenue, Pittsburgh, Pennsylvania 15261, USA.

出版信息

J Am Chem Soc. 2010 Feb 17;132(6):1976-87. doi: 10.1021/ja908687k.

Abstract

In mature HIV-1 virions, the 26.6 kDa CA protein is assembled into a characteristic cone-shaped core (capsid) that encloses the RNA viral genome. The assembled capsid structure is best described by a fullerene cone model that is made up from a hexameric lattice containing a variable number of CA pentamers, thus allowing for closure of tubular or conical structures. In this paper, we present a solid-state NMR analysis of the wild-type HIV-1 CA protein, prepared as conical and spherical assemblies that are stable and are not affected by magic angle spinning of the samples at frequencies between 10 and 25 kHz. Multidimensional homo- and heteronuclear correlation spectra of CA assemblies of uniformly (13)C,(15)N-labeled CA exhibit narrow lines, indicative of the conformational homogeneity of the protein in these assemblies. For the conical assemblies, partial residue-specific resonance assignments were obtained. Analysis of the NMR spectra recorded for the conical and spherical assemblies indicates that the CA protein structure is not significantly different in the different morphologies. The present results demonstrate that the assemblies of CA protein are amenable to detailed structural analysis by solid-state NMR spectroscopy.

摘要

在成熟的 HIV-1 病毒中,26.6kDa 的 CA 蛋白组装成一种特征性的锥形核心(衣壳),该核心包含 RNA 病毒基因组。组装好的衣壳结构最好用富勒烯锥模型来描述,该模型由一个六方晶格组成,其中包含一个可变数量的 CA 五聚体,从而允许管状或锥形结构的闭合。在本文中,我们通过固态 NMR 分析了野生型 HIV-1 CA 蛋白,制备了锥形和球形组装体,这些组装体是稳定的,并且不受样品在 10 至 25 kHz 之间的魔角旋转的影响。均匀(13)C,(15)N 标记 CA 的 CA 组装体的多维同核和异核相关光谱显示出窄线,表明在这些组装体中蛋白质的构象均一性。对于锥形组装体,获得了部分残基特异性共振分配。对记录的锥形和球形组装体的 NMR 光谱进行分析表明,在不同形态下 CA 蛋白结构没有显著差异。目前的结果表明,CA 蛋白的组装体可通过固态 NMR 光谱学进行详细的结构分析。

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本文引用的文献

1
1H, 15N and 13C assignments of the dimeric C-terminal domain of HIV-1 capsid protein.
Biomol NMR Assign. 2010 Apr;4(1):21-3. doi: 10.1007/s12104-009-9198-9. Epub 2009 Nov 18.
3
Solid State NMR Studies of Molecular Recognition at Protein-Mineral Interfaces.
Prog Nucl Magn Reson Spectrosc. 2007 May 30;50(2-3):71-85. doi: 10.1016/j.pnmrs.2006.11.002.
5
Virus maturation as a new HIV-1 therapeutic target.
Expert Opin Ther Targets. 2009 Aug;13(8):895-908. doi: 10.1517/14728220903039714.
6
X-ray structures of the hexameric building block of the HIV capsid.
Cell. 2009 Jun 26;137(7):1282-92. doi: 10.1016/j.cell.2009.04.063. Epub 2009 Jun 11.
7
Solid-state NMR spectroscopy applied to a chimeric potassium channel in lipid bilayers.
J Am Chem Soc. 2008 Jun 11;130(23):7427-35. doi: 10.1021/ja800190c. Epub 2008 May 14.
8
The structural biology of HIV assembly.
Curr Opin Struct Biol. 2008 Apr;18(2):203-17. doi: 10.1016/j.sbi.2008.02.001. Epub 2008 Apr 9.
10
Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core.
Science. 2008 Mar 14;319(5869):1523-6. doi: 10.1126/science.1151839.

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