Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, CZ-16637 Prague, Czech Republic.
Department of Biology, The University, D-78457 Konstanz, Germany.
Microbiology (Reading). 2010 May;156(Pt 5):1547-1555. doi: 10.1099/mic.0.036699-0. Epub 2010 Feb 4.
Bacterial generation of isethionate (2-hydroxyethanesulfonate) from taurine (2-aminoethanesulfonate) by anaerobic gut bacteria was established in 1980. That phenomenon in pure culture was recognized as a pathway of assimilation of taurine-nitrogen. Based on the latter work, we predicted from genome-sequence data that the marine gammaproteobacterium Chromohalobacter salexigens DSM 3043 would exhibit this trait. Quantitative conversion of taurine to isethionate, identified by mass spectrometry, was confirmed, and the taurine-nitrogen was recovered as cell material. An eight-gene cluster was predicted to encode the inducible vectorial, scalar and regulatory enzymes involved, some of which were known from other taurine pathways. The genes (Csal_0153-Csal_0156) encoding a putative ATP-binding-cassette (ABC) transporter for taurine (TauAB(1)B(2)C) were shown to be inducibly transcribed by reverse transcription (RT-) PCR. An inducible taurine : 2-oxoglutarate aminotransferase [EC 2.6.1.55] was found (Csal_0158); the reaction yielded glutamate and sulfoacetaldehyde. The sulfoacetaldehyde was reduced to isethionate by NADPH-dependent sulfoacetaldehyde reductase (IsfD), a member of the short-chain alcohol dehydrogenase superfamily. The 27 kDa protein (SDS-PAGE) was identified by peptide-mass fingerprinting as the gene product of Csal_0161. The putative exporter of isethionate (IsfE) is encoded by Csal_0160; isfE was inducibly transcribed (RT-PCR). The presumed transcriptional regulator, TauR (Csal_0157), may autoregulate its own expression, typical of GntR-type regulators. Similar gene clusters were found in several marine and terrestrial gammaproteobacteria, which, in the gut canal, could be the source of not only mammalian, but also arachnid and cephalopod isethionate.
1980 年,人们发现肠道厌氧菌可以将牛磺酸(2-氨基乙磺酸)转化为异丁酸盐(2-羟乙磺酸盐)。在纯培养条件下,这一现象被认为是牛磺酸氮同化的途径之一。基于这一后续研究,我们根据基因组序列数据预测海洋γ-变形菌盐单胞菌(Chromohalobacter salexigens)DSM 3043 会表现出这一特性。通过质谱鉴定证实了牛磺酸可定量转化为异丁酸盐,且牛磺酸氮作为细胞物质被回收。预测到一个由 8 个基因组成的簇,编码可诱导的定向、标量和调节酶,其中一些酶来自其他牛磺酸途径。基因(Csal_0153-Csal_0156)编码一个假定的牛磺酸(TauAB(1)B(2)C)ATP 结合盒(ABC)转运蛋白,通过反转录(RT-)PCR 证明其可被诱导转录。发现了一个可诱导的牛磺酸:2-氧戊二酸氨基转移酶[EC 2.6.1.55](Csal_0158);该反应产生谷氨酸和亚硫酸乙醛。亚硫酸乙醛被 NADPH 依赖的亚硫酸乙醛还原酶(IsfD)还原为异丁酸盐,IsfD 属于短链醇脱氢酶超家族。通过肽质量指纹图谱鉴定,27 kDa 蛋白(SDS-PAGE)被鉴定为 Csal_0161 的基因产物。假定的异丁酸盐(IsfE)外排蛋白(Csal_0160)由 isfE 编码;isfe 可被诱导转录(RT-PCR)。假定的转录调节因子 TauR(Csal_0157)可能对自身表达进行自身调控,这是 GntR 型调节因子的典型特征。在几种海洋和陆地γ-变形菌中发现了类似的基因簇,这些基因簇不仅可能是哺乳动物肠道中牛磺酸的来源,也可能是蛛形纲动物和头足纲动物异丁酸盐的来源。