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反硝化副球菌中牛磺酸和羟乙磺酸盐异化作用的酶和基因。

Enzymes and genes of taurine and isethionate dissimilation in Paracoccus denitrificans.

作者信息

Brüggemann Chantal, Denger Karin, Cook Alasdair M, Ruff Jürgen

机构信息

Department of Biology, The University, D-78457 Konstanz, Germany.

出版信息

Microbiology (Reading). 2004 Apr;150(Pt 4):805-816. doi: 10.1099/mic.0.26795-0.

Abstract

Growth of the alpha-proteobacterium Paracoccus denitrificans NKNIS with taurine or isethionate as sole source of carbon involves sulfoacetaldehyde acetyltransferase (Xsc), which is presumably encoded by an xsc gene in subgroup 3, none of whose gene products has been characterized. The genome of the alpha-proteobacterium Rhodobacter sphaeroides 2.4.1 was interpreted to contain a nine-gene cluster encoding the inducible dissimilation of taurine, and this deduced pathway included a regulator, a tripartite ATP-independent transporter, taurine dehydrogenase (TDH; presumably TauXY) as well as Xsc (subgroup 3), a hypothetical protein and phosphate acetyltransferase (Pta). A similar cluster was found in P. denitrificans NKNIS, in contrast to an analogous cluster encoding an ATP-binding cassette transporter in Paracoccus pantotrophus. Inducible TDH, Xsc and Pta were found in extracts of taurine-grown cells of strain NKNIS. TDH oxidized taurine to sulfoacetaldehyde and ammonium ion with cytochrome c as electron acceptor. Whereas Xsc and Pta were soluble enzymes, TDH was located in the particulate fraction, where inducible proteins with the expected masses of TauXY (14 and 50 kDa, respectively) were detected by SDS-PAGE. Xsc and Pta were separated by anion-exchange chromatography. Xsc was effectively pure; the molecular mass of the subunit (64 kDa) and the N-terminal amino acid sequence confirmed the identification of the xsc gene. Inducible isethionate dehydrogenase (IDH), Xsc and Pta were assayed in extracts of isethionate-grown cells of strain NKNIS. IDH was located in the particulate fraction, oxidized isethionate to sulfoacetaldehyde with cytochrome c as electron acceptor and correlated with the expression of a 62 kDa protein. Strain NKNIS excreted sulfite and sulfate during growth with a sulfonate and no sulfite dehydrogenase was detected. There is considerable biochemical, genetic and regulatory complexity in the degradation of these simple molecules.

摘要

以牛磺酸或羟乙磺酸盐作为唯一碳源时,反硝化副球菌NKNIS这种α-变形菌的生长涉及磺基乙醛乙酰转移酶(Xsc),该酶可能由第3亚组中的一个xsc基因编码,其基因产物均未得到表征。球形红杆菌2.4.1这种α-变形菌的基因组被解读为包含一个由九个基因组成的簇,该簇编码可诱导的牛磺酸异化作用,这个推导的途径包括一个调节因子、一个不依赖ATP的三联转运体、牛磺酸脱氢酶(TDH;推测为TauXY)以及Xsc(第3亚组)、一个假定蛋白和磷酸乙酰转移酶(Pta)。在反硝化副球菌NKNIS中发现了一个类似的簇,这与泛养副球菌中一个编码ATP结合盒转运体的类似簇不同。在NKNIS菌株以牛磺酸为碳源生长的细胞提取物中发现了可诱导的TDH、Xsc和Pta。TDH以细胞色素c作为电子受体,将牛磺酸氧化为磺基乙醛和铵离子。虽然Xsc和Pta是可溶性酶,但TDH位于颗粒部分,通过SDS-PAGE检测到了预期分子量的TauXY(分别为14和50 kDa)的可诱导蛋白。Xsc和Pta通过阴离子交换色谱法分离。Xsc实际上是纯的;亚基的分子量(64 kDa)和N端氨基酸序列证实了xsc基因的鉴定。在NKNIS菌株以羟乙磺酸盐为碳源生长的细胞提取物中检测了可诱导的羟乙磺酸盐脱氢酶(IDH)、Xsc和Pta。IDH位于颗粒部分,以细胞色素c作为电子受体,将羟乙磺酸盐氧化为磺基乙醛,并与一个62 kDa蛋白的表达相关。NKNIS菌株在以磺酸盐为碳源生长期间会分泌亚硫酸盐和硫酸盐,且未检测到亚硫酸盐脱氢酶。这些简单分子的降解过程存在相当大的生化、遗传和调控复杂性。

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