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组蛋白修饰调控可变剪接。

Regulation of alternative splicing by histone modifications.

机构信息

National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.

出版信息

Science. 2010 Feb 19;327(5968):996-1000. doi: 10.1126/science.1184208. Epub 2010 Feb 4.

DOI:10.1126/science.1184208
PMID:20133523
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2913848/
Abstract

Alternative splicing of pre-mRNA is a prominent mechanism to generate protein diversity, yet its regulation is poorly understood. We demonstrated a direct role for histone modifications in alternative splicing. We found distinctive histone modification signatures that correlate with the splicing outcome in a set of human genes, and modulation of histone modifications causes splice site switching. Histone marks affect splicing outcome by influencing the recruitment of splicing regulators via a chromatin-binding protein. These results outline an adaptor system for the reading of histone marks by the pre-mRNA splicing machinery.

摘要

前体 mRNA 的可变剪接是产生蛋白质多样性的主要机制,但对其调控机制了解甚少。我们证明了组蛋白修饰在可变剪接中的直接作用。我们发现了在一组人类基因中与剪接结果相关的独特组蛋白修饰特征,并发现组蛋白修饰的调节会导致剪接位点的转换。组蛋白标记通过影响剪接调节因子通过染色质结合蛋白的募集来影响剪接结果。这些结果概述了一个适体系统,用于前体 mRNA 剪接机制读取组蛋白标记。

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Regulation of alternative splicing by histone modifications.组蛋白修饰调控可变剪接。
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2
Chromatin: the final frontier in splicing regulation?染色质:剪接调控的终极疆域?
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3
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本文引用的文献

1
Biased chromatin signatures around polyadenylation sites and exons.多聚腺苷酸化位点和外显子周围的染色质特征偏差。
Mol Cell. 2009 Oct 23;36(2):245-54. doi: 10.1016/j.molcel.2009.10.008.
2
Nucleosomes are well positioned in exons and carry characteristic histone modifications.核小体在外显子中定位良好,并带有特征性的组蛋白修饰。
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Chromatin organization marks exon-intron structure.染色质组织标记外显子-内含子结构。
Nat Struct Mol Biol. 2009 Sep;16(9):990-5. doi: 10.1038/nsmb.1659.
4
Nucleosome positioning as a determinant of exon recognition.核小体定位作为外显子识别的一个决定因素。
Nat Struct Mol Biol. 2009 Sep;16(9):996-1001. doi: 10.1038/nsmb.1658.
5
Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins.对RNA结合蛋白的RNA识别特异性进行快速系统分析。
Nat Biotechnol. 2009 Jul;27(7):667-70. doi: 10.1038/nbt.1550. Epub 2009 Jun 28.
6
Control of alternative splicing through siRNA-mediated transcriptional gene silencing.通过小干扰RNA介导的转录基因沉默来控制可变剪接
Nat Struct Mol Biol. 2009 Jul;16(7):717-24. doi: 10.1038/nsmb.1620. Epub 2009 Jun 21.
7
DNA damage regulates alternative splicing through inhibition of RNA polymerase II elongation.DNA损伤通过抑制RNA聚合酶II的延伸来调控可变剪接。
Cell. 2009 May 15;137(4):708-20. doi: 10.1016/j.cell.2009.03.010.
8
ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing.ESRP1和ESRP2是FGFR2剪接的上皮细胞类型特异性调节因子。
Mol Cell. 2009 Mar 13;33(5):591-601. doi: 10.1016/j.molcel.2009.01.025.
9
Neuronal cell depolarization induces intragenic chromatin modifications affecting NCAM alternative splicing.神经元细胞去极化诱导影响神经细胞黏附分子可变剪接的基因内染色质修饰。
Proc Natl Acad Sci U S A. 2009 Mar 17;106(11):4325-30. doi: 10.1073/pnas.0810666106. Epub 2009 Feb 26.
10
Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation.组蛋白H3丝氨酸10磷酸化可调节SRp20和ASF/SF2与染色质的结合以及它们从有丝分裂染色体上的解离。
Mol Cell. 2009 Feb 27;33(4):450-61. doi: 10.1016/j.molcel.2009.02.003.