在 ERGO-1/Argonaute 通路中,RNA 依赖性 RNA 转录的连续循环驱动内源性小 RNA 的生物发生。

Sequential rounds of RNA-dependent RNA transcription drive endogenous small-RNA biogenesis in the ERGO-1/Argonaute pathway.

机构信息

Howard Hughes Medical Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA.

出版信息

Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3582-7. doi: 10.1073/pnas.0911908107. Epub 2010 Feb 2.

Abstract

Argonaute (AGO) proteins interact with distinct classes of small RNAs to direct multiple regulatory outcomes. In many organisms, including plants, fungi, and nematodes, cellular RNA-dependent RNA polymerases (RdRPs) use AGO targets as templates for amplification of silencing signals. Here, we show that distinct RdRPs function sequentially to produce small RNAs that target endogenous loci in Caenorhabditis elegans. We show that DCR-1, the RdRP RRF-3, and the dsRNA-binding protein RDE-4 are required for the biogenesis of 26-nt small RNAs with a 5' guanine (26G-RNAs) and that 26G-RNAs engage the Piwi-clade AGO, ERGO-1. Our findings support a model in which targeting by ERGO-1 recruits a second RdRP (RRF-1 or EGO-1), which in turn transcribes 22G-RNAs that interact with worm-specific AGOs (WAGOs) to direct gene silencing. ERGO-1 targets exhibit a nonrandom distribution in the genome and appear to include many gene duplications, suggesting that this pathway may control overexpression resulting from gene expansion.

摘要

Argonaute (AGO) 蛋白与不同类别的小 RNA 相互作用,以指导多种调节结果。在许多生物体中,包括植物、真菌和线虫,细胞 RNA 依赖性 RNA 聚合酶 (RdRP) 将 AGO 靶标用作沉默信号扩增的模板。在这里,我们表明不同的 RdRP 依次发挥作用,产生靶向秀丽隐杆线虫内源基因座的小 RNA。我们表明,DCR-1、RdRP RRF-3 和 dsRNA 结合蛋白 RDE-4 是产生具有 5' 鸟嘌呤 (26G-RNAs) 的 26-nt 小 RNA 的生物发生所必需的,并且 26G-RNAs 与 Piwi 家族 AGO、ERGO-1 结合。我们的研究结果支持这样一种模型,即 ERGO-1 的靶向招募第二个 RdRP (RRF-1 或 EGO-1),后者反过来转录 22G-RNAs,与虫特异性 AGO (WAGO) 相互作用,以指导基因沉默。ERGO-1 靶标在基因组中呈现非随机分布,并且似乎包括许多基因重复,表明该途径可能控制由于基因扩展导致的过表达。

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