• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

鉴定一种非常规的 UbcH5~Ub 缀合物上的 E3 结合表面,该表面被一种致病细菌的 E3 连接酶所识别。

Identification of an unconventional E3 binding surface on the UbcH5 ~ Ub conjugate recognized by a pathogenic bacterial E3 ligase.

机构信息

Department of Immunology, University of Washington, Seattle, WA 98195, USA.

出版信息

Proc Natl Acad Sci U S A. 2010 Feb 16;107(7):2848-53. doi: 10.1073/pnas.0914821107. Epub 2010 Feb 1.

DOI:10.1073/pnas.0914821107
PMID:20133640
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2840284/
Abstract

Gram-negative bacteria deliver a cadre of virulence factors directly into the cytoplasm of eukaryotic host cells to promote pathogenesis and/or commensalism. Recently, families of virulence proteins have been recognized that function as E3 Ubiquitin-ligases. How these bacterial ligases integrate into the ubiquitin (Ub) signaling pathways of the host and how they differ functionally from endogenous eukaryotic E3s is not known. Here we show that the bacterial E3 SspH2 from S. typhimurium selectively binds the human UbcH5 ~ Ub conjugate recognizing regions of both UbcH5 and Ub subunits. The surface of the E2 UbcH5 involved in this interaction differs substantially from that defined for other E2/E3 complexes involving eukaryotic E3-ligases. In vitro, SspH2 directs the synthesis of K48-linked poly-Ub chains, suggesting that cellular protein targets of SspH2-catalyzed Ub transfer are destined for proteasomal destruction. Unexpectedly, we found that intermediates in SspH2-directed reactions are activated poly-Ub chains directly tethered to the UbcH5 active site (UbcH5 ~ Ub(n)). Rapid generation of UbcH5 ~ Ub(n) may allow for bacterially directed modification of eukaryotic target proteins with a completed poly-Ub chain, efficiently tagging host targets for destruction.

摘要

革兰氏阴性菌将一系列毒力因子直接递送到真核宿主细胞的细胞质中,以促进发病机制和/或共生。最近,已经识别出一系列作为 E3 泛素连接酶发挥作用的毒力蛋白家族。这些细菌连接酶如何整合到宿主的泛素 (Ub) 信号通路中,以及它们在功能上与内源性真核 E3 有何不同,目前尚不清楚。在这里,我们表明来自 S. typhimurium 的细菌 E3 SspH2 选择性地结合人 UbcH5Ub 缀合物,识别 UbcH5 和 Ub 亚基的区域。涉及此相互作用的 E2 UbcH5 的表面与涉及真核 E3 连接酶的其他 E2/E3 复合物定义的表面有很大不同。在体外,SspH2 指导 K48 连接多 Ub 链的合成,这表明 SspH2 催化 Ub 转移的细胞蛋白靶标注定要被蛋白酶体破坏。出乎意料的是,我们发现 SspH2 定向反应的中间产物是直接连接到 UbcH5 活性位点的激活多 Ub 链(UbcH5Ub(n))。UbcH5~Ub(n)的快速生成可能允许细菌对具有完整多 Ub 链的真核靶蛋白进行定向修饰,有效地标记宿主靶标进行破坏。

相似文献

1
Identification of an unconventional E3 binding surface on the UbcH5 ~ Ub conjugate recognized by a pathogenic bacterial E3 ligase.鉴定一种非常规的 UbcH5~Ub 缀合物上的 E3 结合表面,该表面被一种致病细菌的 E3 连接酶所识别。
Proc Natl Acad Sci U S A. 2010 Feb 16;107(7):2848-53. doi: 10.1073/pnas.0914821107. Epub 2010 Feb 1.
2
Certain pairs of ubiquitin-conjugating enzymes (E2s) and ubiquitin-protein ligases (E3s) synthesize nondegradable forked ubiquitin chains containing all possible isopeptide linkages.某些泛素结合酶(E2)和泛素蛋白连接酶(E3)对可合成包含所有可能异肽键的不可降解叉状泛素链。
J Biol Chem. 2007 Jun 15;282(24):17375-86. doi: 10.1074/jbc.M609659200. Epub 2007 Apr 10.
3
The ubiquitin ligase SspH1 from uses a modular and dynamic E3 domain to catalyze substrate ubiquitylation.来自 的泛素连接酶 SspH1 使用模块化和动态的 E3 结构域来催化底物泛素化。
J Biol Chem. 2019 Jan 18;294(3):783-793. doi: 10.1074/jbc.RA118.004247. Epub 2018 Nov 20.
4
A UbcH5/ubiquitin noncovalent complex is required for processive BRCA1-directed ubiquitination.进行性BRCA1介导的泛素化需要UbcH5/泛素非共价复合物。
Mol Cell. 2006 Mar 17;21(6):873-80. doi: 10.1016/j.molcel.2006.02.008.
5
UbcH5 Interacts with Substrates to Participate in Lysine Selection with the E3 Ubiquitin Ligase CHIP.UbcH5 与底物相互作用,与 E3 泛素连接酶 CHIP 一起参与赖氨酸选择。
Biochemistry. 2020 Jun 9;59(22):2078-2088. doi: 10.1021/acs.biochem.0c00084. Epub 2020 May 27.
6
Determinants of E2-ubiquitin conjugate recognition by RBR E3 ligases.RBR E3 连接酶识别 E2-泛素缀合物的决定因素。
Sci Rep. 2018 Jan 8;8(1):68. doi: 10.1038/s41598-017-18513-5.
7
Mechanism of catalysis, E2 recognition, and autoinhibition for the IpaH family of bacterial E3 ubiquitin ligases.细菌E3泛素连接酶IpaH家族的催化机制、E2识别及自身抑制
Proc Natl Acad Sci U S A. 2017 Feb 7;114(6):1311-1316. doi: 10.1073/pnas.1611595114. Epub 2017 Jan 23.
8
Monoubiquitination is critical for ovarian tumor domain-containing ubiquitin aldehyde binding protein 1 (Otub1) to suppress UbcH5 enzyme and stabilize p53 protein.单泛素化对于卵巢肿瘤结构域包含的泛素醛结合蛋白 1(Otub1)抑制 UbcH5 酶和稳定 p53 蛋白至关重要。
J Biol Chem. 2014 Feb 21;289(8):5097-108. doi: 10.1074/jbc.M113.533109. Epub 2014 Jan 8.
9
On the Possibility That Bond Strain Is the Mechanism of RING E3 Activation in the E2-Catalyzed Ubiquitination Reaction.关于环 E3 激活在 E2 催化泛素化反应中是通过结合应变机制实现的可能性。
J Chem Inf Model. 2022 Dec 26;62(24):6475-6481. doi: 10.1021/acs.jcim.2c00423. Epub 2022 Jun 7.
10
Formation of nondegradable forked ubiquitin conjugates by ring-finger ligases and its prevention by S5a.由泛素连接酶形成不可降解的叉状泛素缀合物及其被S5a阻止的过程
Methods Mol Biol. 2012;832:639-52. doi: 10.1007/978-1-61779-474-2_45.

引用本文的文献

1
The Effector SspH2 Facilitates Spatially Selective Ubiquitination of NOD1 to Enhance Inflammatory Signaling.效应子 SspH2 促进 NOD1 的空间选择性泛素化,增强炎症信号转导。
Biochemistry. 2024 Sep 17;63(18):2266-2279. doi: 10.1021/acs.biochem.4c00380. Epub 2024 Aug 27.
2
Structural basis for transthiolation intermediates in the ubiquitin pathway.泛素途径中转硫中间产物的结构基础。
Nature. 2024 Sep;633(8028):216-223. doi: 10.1038/s41586-024-07828-9. Epub 2024 Aug 14.
3
Capturing the catalytic intermediates of parkin ubiquitination.捕获 parkin 泛素化的催化中间体。
Proc Natl Acad Sci U S A. 2024 Aug 6;121(32):e2403114121. doi: 10.1073/pnas.2403114121. Epub 2024 Jul 30.
4
Genomic investigation of Salmonella enterica Serovar Welikade from a pediatric diarrhea case first time in Shanghai, China.中国上海首次从小儿腹泻病例中分离出肠炎沙门氏菌血清型 Welikade 的基因组研究。
BMC Genomics. 2024 Jun 17;25(1):604. doi: 10.1186/s12864-024-10489-7.
5
Bacterial ligases reveal fundamental principles of polyubiquitin specificity.细菌连接酶揭示了多泛素特异性的基本原理。
Mol Cell. 2023 Dec 21;83(24):4538-4554.e4. doi: 10.1016/j.molcel.2023.11.017. Epub 2023 Dec 12.
6
Ubiquitin-targeted bacterial effectors: rule breakers of the ubiquitin system.泛素靶向细菌效应物:泛素系统的破坏者。
EMBO J. 2023 Sep 18;42(18):e114318. doi: 10.15252/embj.2023114318. Epub 2023 Aug 9.
7
Bacterial mimicry of eukaryotic HECT ubiquitin ligation.细菌对真核HECT泛素连接的模拟。
bioRxiv. 2023 Jun 5:2023.06.05.543783. doi: 10.1101/2023.06.05.543783.
8
The NEL Family of Bacterial E3 Ubiquitin Ligases.细菌 E3 泛素连接酶 NEL 家族。
Int J Mol Sci. 2022 Jul 13;23(14):7725. doi: 10.3390/ijms23147725.
9
Capturing SspH2 Host Targets in Virus-Like Particles.在病毒样颗粒中捕获SspH2宿主靶点。
Front Med (Lausanne). 2021 Sep 8;8:725072. doi: 10.3389/fmed.2021.725072. eCollection 2021.
10
UBCH5 Family Members Differentially Impact Stabilization of Mutant p53 via RNF128 Iso1 During Barrett's Progression to Esophageal Adenocarcinoma.UBCH5 家族成员通过 RNF128 Iso1 对 Barrett 食管向食管腺癌进展过程中突变型 p53 的稳定性产生差异影响。
Cell Mol Gastroenterol Hepatol. 2022;13(1):129-149. doi: 10.1016/j.jcmgh.2021.08.003. Epub 2021 Aug 17.

本文引用的文献

1
Insights into ubiquitin transfer cascades from a structure of a UbcH5B approximately ubiquitin-HECT(NEDD4L) complex.泛素转移级联反应的研究进展:UbcH5B 与泛素-HECT(NEDD4L)复合物的结构。
Mol Cell. 2009 Dec 25;36(6):1095-102. doi: 10.1016/j.molcel.2009.11.010.
2
Polyubiquitination by HECT E3s and the determinants of chain type specificity.HECT E3s 的多泛素化和链类型特异性的决定因素。
Mol Cell Biol. 2009 Jun;29(12):3307-18. doi: 10.1128/MCB.00240-09. Epub 2009 Apr 13.
3
A family of Salmonella virulence factors functions as a distinct class of autoregulated E3 ubiquitin ligases.沙门氏菌毒力因子家族作为一类独特的自调控E3泛素连接酶发挥作用。
Proc Natl Acad Sci U S A. 2009 Mar 24;106(12):4864-9. doi: 10.1073/pnas.0811058106. Epub 2009 Mar 9.
4
Mechanistic insights into active site-associated polyubiquitination by the ubiquitin-conjugating enzyme Ube2g2.泛素结合酶Ube2g2对活性位点相关多聚泛素化的机制性见解。
Proc Natl Acad Sci U S A. 2009 Mar 10;106(10):3722-7. doi: 10.1073/pnas.0808564106. Epub 2009 Feb 17.
5
Structure of a Shigella effector reveals a new class of ubiquitin ligases.一种志贺氏菌效应蛋白的结构揭示了一类新型泛素连接酶。
Nat Struct Mol Biol. 2008 Dec;15(12):1302-8. doi: 10.1038/nsmb.1517. Epub 2008 Nov 9.
6
Structure of the Shigella T3SS effector IpaH defines a new class of E3 ubiquitin ligases.志贺氏菌Ⅲ型分泌系统效应蛋白IpaH的结构定义了一类新型E3泛素连接酶。
Nat Struct Mol Biol. 2008 Dec;15(12):1293-301. doi: 10.1038/nsmb.1511. Epub 2008 Nov 9.
7
Legionella translocates an E3 ubiquitin ligase that has multiple U-boxes with distinct functions.嗜肺军团菌转运一种具有多个功能各异的U盒的E3泛素连接酶。
Mol Microbiol. 2008 Mar;67(6):1307-19. doi: 10.1111/j.1365-2958.2008.06124.x. Epub 2008 Feb 13.
8
Crystal structure of SopA, a Salmonella effector protein mimicking a eukaryotic ubiquitin ligase.模仿真核泛素连接酶的沙门氏菌效应蛋白SopA的晶体结构。
Nat Struct Mol Biol. 2008 Jan;15(1):65-70. doi: 10.1038/nsmb1346. Epub 2007 Dec 9.
9
Type III secretion effectors of the IpaH family are E3 ubiquitin ligases.IpaH家族的III型分泌效应蛋白是E3泛素连接酶。
Cell Host Microbe. 2007 Mar 15;1(1):77-83. doi: 10.1016/j.chom.2007.02.002.
10
E2-BRCA1 RING interactions dictate synthesis of mono- or specific polyubiquitin chain linkages.E2与BRCA1的环状结构域相互作用决定了单泛素链或特定多泛素链连接的合成。
Nat Struct Mol Biol. 2007 Oct;14(10):941-8. doi: 10.1038/nsmb1295. Epub 2007 Sep 16.