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从多个核基因序列推断出哺乳动物食肉目多样化的模式和时间。

Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences.

机构信息

Faculdade de Biociências, PUCRS, Porto Alegre, RS, Brazil.

出版信息

Mol Phylogenet Evol. 2010 Jul;56(1):49-63. doi: 10.1016/j.ympev.2010.01.033. Epub 2010 Feb 4.

Abstract

The mammalian order Carnivora has attracted the attention of scientists of various disciplines for decades, leading to intense interest in defining its supra-familial relationships. In the last few years, major changes to the topological structure of the carnivoran tree have been proposed and supported by various molecular data sets, radically changing the traditional view of family composition in this order. Although a sequence of molecular studies have established a growing consensus with respect to most inter-familial relationships, no analysis so far has included all carnivoran lineages (both feliform and caniform) in an integrated data set, so as to determine comparative patterns of diversification. Moreover, no study conducted thus far has estimated divergence dates among all carnivoran families, which is an important requirement in the attempt to understand the patterns and tempo of diversification in this group. In this study, we have investigated the phylogenetic relationships among carnivoran families, and performed molecular dating analyses of the inferred nodes. We assembled a molecular supermatrix containing 14 genes (7765 bp), most of which have not been previously used in supra-familial carnivoran phylogenetics, for 50 different genera representing all carnivoran families. Analysis of this data set led to consistent and robust resolution of all supra-familial nodes in the carnivoran tree, and allowed the construction of a molecular timescale for the evolution of this mammalian order.

摘要

哺乳动物食肉目(Carnivora)吸引了各个学科的科学家数十年的关注,促使人们强烈关注其超科亲缘关系的定义。在过去的几年中,基于各种分子数据集,食肉目树的拓扑结构发生了重大变化,这彻底改变了该目科组成的传统观点。尽管一系列分子研究已经就大多数科间关系达成了越来越多的共识,但迄今为止,没有任何分析将所有食肉目谱系(包括猫型亚目和犬型亚目)纳入综合数据集,以确定多样化的比较模式。此外,迄今为止,没有任何研究对所有食肉目科进行了分歧日期估计,这是尝试理解该群体多样化模式和速度的重要要求。在这项研究中,我们调查了食肉目科之间的系统发育关系,并对推断的节点进行了分子定年分析。我们组装了一个包含 14 个基因(7765 个碱基对)的分子超级矩阵,这些基因大部分以前都没有用于超科食肉目系统发育,涵盖了所有食肉目科的 50 个不同属。对该数据集的分析一致且稳健地解决了食肉目树中所有超科节点的问题,并为该哺乳动物目的进化构建了分子时间尺度。

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