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使用无细胞体外系统研究果蝇的 DNA 复制。

Study of DNA replication in Drosophila using cell free in vitro system.

机构信息

Department of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, School of Medicine, Birmingham, AL, USA.

出版信息

Cell Cycle. 2010 Feb 15;9(4):815-9. doi: 10.4161/cc.9.4.10730. Epub 2010 Feb 23.

DOI:10.4161/cc.9.4.10730
PMID:20139730
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6010192/
Abstract

Using Drosophila early egg extracts we have developed an optimized cell free system to study DNA replication. The efficiency of replication depends on a cold treatment of Drosophila embryos before the extract preparation and a formation of nuclei facilitated by the addition of membrane fractions to the extracts. In vitro DNA replication is ORC and CDC6 dependent, as a removal of these proteins from the extracts abolishes DNA replication. The N-terminal part of Orc1 protein, which is important for non-replicative functions of ORC, is dispensable for the replication in vitro. We also show that the conserved ATP ase motif of CDC6 is crucial for the replication. Our studies indicate that a Drosophila cell free system proves to be an extremely useful tool for a functional dissection of the processes and factors involved in DNA replication in metazoans.

摘要

利用果蝇早期卵提取物,我们开发了一种优化的无细胞体系来研究 DNA 复制。复制效率取决于在提取物制备前对果蝇胚胎进行低温处理,以及通过向提取物中添加膜部分来促进核的形成。体外 DNA 复制依赖于 ORC 和 CDC6,因为从提取物中去除这些蛋白质会导致 DNA 复制的丧失。Orc1 蛋白的 N 端部分对于 ORC 的非复制功能很重要,但对于体外复制是可有可无的。我们还表明,CDC6 的保守 ATP 酶基序对于复制至关重要。我们的研究表明,果蝇无细胞体系是研究真核生物 DNA 复制过程和参与因素的功能分析的极其有用的工具。

相似文献

1
Study of DNA replication in Drosophila using cell free in vitro system.使用无细胞体外系统研究果蝇的 DNA 复制。
Cell Cycle. 2010 Feb 15;9(4):815-9. doi: 10.4161/cc.9.4.10730. Epub 2010 Feb 23.
2
Conformational control and DNA-binding mechanism of the metazoan origin recognition complex.后生动物起始识别复合物的构象控制和 DNA 结合机制。
Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):E5906-E5915. doi: 10.1073/pnas.1806315115. Epub 2018 Jun 13.
3
MCM interference during licensing of DNA replication in Xenopus egg extracts-Possible Role of a C-terminal region of MCM3.MCM 干扰在爪蟾卵提取物中 DNA 复制的许可-可能是 MCM3 的 C 末端区域的作用。
Cell Cycle. 2018;17(4):492-505. doi: 10.1080/15384101.2017.1415681. Epub 2018 Jan 30.
4
Conservation of epigenetic regulation, ORC binding and developmental timing of DNA replication origins in the genus Drosophila.果蝇属中表观遗传调控、ORC 结合与 DNA 复制起点的发育时间的保守性。
Genetics. 2007 Nov;177(3):1291-301. doi: 10.1534/genetics.107.070862.
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The origin recognition complex is dispensable for endoreplication in Drosophila.起始识别复合体对于果蝇的内复制是可有可无的。
Proc Natl Acad Sci U S A. 2008 Aug 26;105(34):12343-8. doi: 10.1073/pnas.0805189105. Epub 2008 Aug 18.
6
The roles of the MCM, ORC, and Cdc6 proteins in determining the replication competence of chromatin in quiescent cells.MCM、ORC和Cdc6蛋白在决定静止细胞中染色质复制能力方面的作用。
J Struct Biol. 2000 Apr;129(2-3):198-210. doi: 10.1006/jsbi.2000.4218.
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Functional analysis of an Orc6 mutant in Drosophila.果蝇中Orc6突变体的功能分析。
Proc Natl Acad Sci U S A. 2009 Jun 30;106(26):10672-7. doi: 10.1073/pnas.0902670106. Epub 2009 Jun 16.
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Two subunits of human ORC are dispensable for DNA replication and proliferation.人源复制起始复合物(ORC)的两个亚基对于DNA复制和增殖并非必需。
Elife. 2016 Dec 1;5:e19084. doi: 10.7554/eLife.19084.
9
Role of the Orc6 protein in origin recognition complex-dependent DNA binding and replication in Drosophila melanogaster.Orc6蛋白在黑腹果蝇中依赖于起始识别复合物的DNA结合及复制中的作用
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10
Dynamics of DNA binding of replication initiation proteins during de novo formation of pre-replicative complexes in Xenopus egg extracts.非洲爪蟾卵提取物中复制前复合物从头形成过程中复制起始蛋白与DNA结合的动力学
J Biol Chem. 2006 Apr 21;281(16):10926-34. doi: 10.1074/jbc.M600299200. Epub 2006 Feb 22.

引用本文的文献

1
Structural basis of DNA replication origin recognition by human Orc6 protein binding with DNA.人类 Orc6 蛋白与 DNA 结合识别 DNA 复制起始点的结构基础。
Nucleic Acids Res. 2020 Nov 4;48(19):11146-11161. doi: 10.1093/nar/gkaa751.
2
Regulating DNA replication in eukarya.真核生物中 DNA 复制的调控。
Cold Spring Harb Perspect Biol. 2013 Sep 1;5(9):a012930. doi: 10.1101/cshperspect.a012930.

本文引用的文献

1
Multiple functions of the origin recognition complex.复制起点识别复合体的多种功能。
Int Rev Cytol. 2007;256:69-109. doi: 10.1016/S0074-7696(07)56003-1.
2
Sequential ATP hydrolysis by Cdc6 and ORC directs loading of the Mcm2-7 helicase.Cdc6和ORC依次进行ATP水解引导Mcm2-7解旋酶的装载。
Mol Cell. 2006 Jan 6;21(1):29-39. doi: 10.1016/j.molcel.2005.11.023.
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Mitotic remodeling of the replicon and chromosome structure.复制子和染色体结构的有丝分裂重塑。
Cell. 2005 Dec 2;123(5):787-801. doi: 10.1016/j.cell.2005.08.045.
4
Right place, right time, and only once: replication initiation in metazoans.正确的地点、正确的时间,且仅此一次:后生动物中的复制起始
Cell. 2005 Oct 7;123(1):13-24. doi: 10.1016/j.cell.2005.09.019.
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Eukaryotic origins of DNA replication: could you please be more specific?DNA复制的真核生物起源:你能更具体些吗?
Semin Cell Dev Biol. 2005 Jun;16(3):343-53. doi: 10.1016/j.semcdb.2005.02.009.
6
Cell cycle dependent regulation of the origin recognition complex.复制起始识别复合体的细胞周期依赖性调控。
Cell Cycle. 2005 Jan;4(1):70-9. doi: 10.4161/cc.4.1.1333. Epub 2005 Jan 29.
7
ATP hydrolysis by ORC catalyzes reiterative Mcm2-7 assembly at a defined origin of replication.ORC催化的ATP水解在特定的复制起点催化Mcm2-7的反复组装。
Mol Cell. 2004 Dec 22;16(6):967-78. doi: 10.1016/j.molcel.2004.11.038.
8
In search of the holy replicator.寻找神圣的复制器。
Nat Rev Mol Cell Biol. 2004 Oct;5(10):848-55. doi: 10.1038/nrm1495.
9
Regulation of early events in chromosome replication.染色体复制早期事件的调控。
Curr Biol. 2004 Sep 21;14(18):R778-86. doi: 10.1016/j.cub.2004.09.019.
10
Degradation of origin recognition complex large subunit by the anaphase-promoting complex in Drosophila.果蝇中后期促进复合物对复制起点识别复合物大亚基的降解作用
EMBO J. 2003 Nov 17;22(22):6115-26. doi: 10.1093/emboj/cdg573.