Pharmacogenomics Laboratory, Centre Hospitalier Universitaire de Québec (CHUQ), Canada.
Pharmacogenet Genomics. 2010 Mar;20(3):195-210. doi: 10.1097/FPC.0b013e328336ef1c.
UGT2B4 is a member of the UDP-glucuronosyltransferase (UGT) superfamily, a major detoxifying system in humans. UGT2B4 is involved in bile acids metabolism and highly expressed in liver and extrahepatic tissues. The aim of this study was to uncover new molecular mechanisms underlying interindividual variability in the UGT2B4 pathway.
We carried out a comprehensive scan for additional exons at this locus and discovered multiple alternative splicing events. We then assessed the expression profile of alternatively spliced transcripts in human tissues and the activity of the corresponding overexpressed proteins toward bile acids.
We discovered three previously unidentified UGT2B4 exons, increasing the total known gene length to 46 kb. Molecular analyses revealed at least eight distinct mRNAs produced by (i) alternative promoter usage, (ii) complete and partial exon skipping, and (iii) use of alternative 3' splice sites. These splice variants were predominantly expressed in liver, gastrointestinal tract, and other extrahepatic tissues. Quantitative analyses of splicing events further sustain their prevalence in the liver. UGT2B4 proteins produced from these mRNA variants had undetectable transferase activity in human cells. However, when stably co-expressed with the active UGT2B4 isoform 1, three newly identified UGT2B4 isoforms (i2, i3, and i5) were found to negatively regulate glucuronidation.
In addition to heritable genetic mutations and control of gene expression, the newly discovered diversity of UGT2B4 mRNAs may introduce variability in this glucuronidation pathway.
UGT2B4 是 UDP-葡糖醛酸基转移酶 (UGT) 超家族的成员,是人体内主要的解毒系统。UGT2B4 参与胆汁酸代谢,在肝脏和肝外组织中高度表达。本研究旨在揭示 UGT2B4 途径个体间变异性的新分子机制。
我们在该基因座上进行了额外外显子的全面扫描,并发现了多个选择性剪接事件。然后,我们评估了人组织中选择性剪接转录本的表达谱以及相应过表达蛋白对胆汁酸的活性。
我们发现了三个以前未识别的 UGT2B4 外显子,使已知基因的总长度增加到 46kb。分子分析显示,至少有八种不同的 mRNA 由(i)替代启动子使用、(ii)完全和部分外显子跳跃和(iii)使用替代 3' 剪接位点产生。这些剪接变体主要在肝脏、胃肠道和其他肝外组织中表达。剪接事件的定量分析进一步支持它们在肝脏中的普遍性。从这些 mRNA 变体产生的 UGT2B4 蛋白在人细胞中没有检测到转移酶活性。然而,当与活性 UGT2B4 同工型 1 稳定共表达时,发现三种新鉴定的 UGT2B4 同工型(i2、i3 和 i5)可负调节葡萄糖醛酸化。
除了可遗传的基因突变和基因表达的控制外,新发现的 UGT2B4 mRNA 多样性可能会使该葡萄糖醛酸化途径产生变异性。