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UGT2B7 基因座的转录多样性由广泛的前体 mRNA 剪接机制决定,这些机制产生了多种 mRNA 剪接变体。

Transcriptional diversity at the UGT2B7 locus is dictated by extensive pre-mRNA splicing mechanisms that give rise to multiple mRNA splice variants.

机构信息

Pharmacogenomics Laboratory, CHUQ Research Center and Faculty of Pharmacy, Laval University, Québec, Canada.

出版信息

Pharmacogenet Genomics. 2011 Oct;21(10):631-41. doi: 10.1097/FPC.0b013e3283498147.

Abstract

OBJECTIVE

UGT2B7 is a key member of the UDP-glucuronosyltransferase (UGT) family that participates in glucuronidation of endogenous compounds and pharmaceuticals. Much evidence suggests a large interindividual variability of UGT2B7-mediated glucuronidation, which is still unexplained by polymorphisms. We hypothesized that alternative splicing may be responsible for the variability in the UGT2B7 function.

METHODS

We carried out a comprehensive scan for additional exons at this locus and discovered multiple alternative splicing events. We then determined transcript expression profiles across a large variety of human tissues and assessed some of these variants for their glucuronidation activity in human cells.

RESULTS

In-depth analysis of the UGT2B7 gene structure led to the discovery of six novel exons. Kidney and liver samples presented the greatest enrichment of tissue-specific splicing, with 21 new UGT2B7 transcripts isolated. Furthermore, transcription from the proximal promoter (exon 1), associated with the active UGT2B7 mRNA isoform 1 (UGT2B7_v1), is most commonly observed in the gastrointestinal tract, whereas a distal promoter (exon 1a) induces the exclusion of the canonical exon 1 and is active in hormone-related tissues. We also showed that novel transcripts with alternative 3' ends could be translated into proteins lacking glucuronosyltransferase activity in human cells but acting as negative regulators on transferase activity when coexpressed with the active UGT2B7 protein.

CONCLUSION

Our findings point toward a significant variability in structure, abundance, and tissue-specific UGT2B7 transcriptome, in addition to novel functions for UGT2B7-derived proteins, all of which may ensure the production of tissue-specific proteomes and functions.

摘要

目的

UGT2B7 是 UDP-葡糖醛酸基转移酶(UGT)家族的关键成员,参与内源性化合物和药物的葡糖醛酸化。大量证据表明,UGT2B7 介导的葡糖醛酸化个体间存在很大的变异性,这种变异性尚未被多态性解释。我们假设选择性剪接可能是 UGT2B7 功能变异性的原因。

方法

我们对该基因座的额外外显子进行了全面扫描,并发现了多种选择性剪接事件。然后,我们测定了跨多种人类组织的转录表达谱,并评估了其中一些变体在人细胞中的葡糖醛酸化活性。

结果

对 UGT2B7 基因结构的深入分析导致发现了六个新的外显子。肾脏和肝脏样本呈现出最丰富的组织特异性剪接,分离出 21 种新的 UGT2B7 转录本。此外,与活性 UGT2B7 mRNA 同工型 1(UGT2B7_v1)相关的近端启动子(外显子 1)的转录最常见于胃肠道,而远端启动子(外显子 1a)诱导排除经典外显子 1 并在与激素相关的组织中活跃。我们还表明,具有替代 3' 末端的新转录本可在人细胞中翻译为缺乏葡糖醛酸基转移酶活性的蛋白质,但当与活性 UGT2B7 蛋白共同表达时,它们作为转移酶活性的负调节剂起作用。

结论

我们的研究结果表明,UGT2B7 的结构、丰度和组织特异性转录组存在显著的变异性,以及 UGT2B7 衍生蛋白的新功能,所有这些都可能确保组织特异性蛋白质组和功能的产生。

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