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通过快速二维 NMR 光谱监测活细胞的实时代谢。

Monitoring real-time metabolism of living cells by fast two-dimensional NMR spectroscopy.

机构信息

Istituto di Chimica Biomolecolare del Consiglio Nazionale delle Ricerche, I-80078 Pozzuoli (NA), Italy.

出版信息

Anal Chem. 2010 Mar 15;82(6):2405-11. doi: 10.1021/ac9026934.

DOI:10.1021/ac9026934
PMID:20155926
Abstract

Living cell metabolism is often monitored by 1D NMR spectroscopy, but the spectral resolution and the short cell lifetime are certainly limiting aspects. 2D spectroscopy does yield higher resolution but is time-consuming since acquisition of the second dimension requires several minutes. However, after only few minutes, oxygen starvation changes cell metabolism, and long acquisition times may yield spectra that do not represent the cell physiological state. Accordingly, metabolic studies of cells require fast NMR data acquisition. Here, we have applied band-selective optimized flip-angle short-transient (SOFAST)-HMQC techniques to (15)N-labeled cells, showing for the first time that it is possible to obtain 2D (1)H-(15)N correlation spectra of small metabolites directly in living cells, in a few seconds and with a high S/N ratio. SOFAST-HMQC spectra of (15)N-labeled Thalassiosira rotula diatoms cells can be acquired in 10-15 s, and, as an application, we have detected a progressive variation of the amino acid content when diatoms are exposed to UV-B radiation, with no need of long analytical procedures to quantify the metabolic changes. We believe that fast acquisition techniques can easily be extended to other cell systems, foreseeing a wide application in the emerging fields of metabolomics and metabonomics, being able to picture the "instantaneous" in-cell metabolism.

摘要

活细胞代谢通常通过 1D NMR 光谱进行监测,但光谱分辨率和细胞寿命短肯定是限制因素。2D 光谱确实可以提供更高的分辨率,但耗时较长,因为获取第二维需要几分钟。然而,仅仅几分钟后,缺氧就会改变细胞代谢,长时间的采集可能会产生不能代表细胞生理状态的光谱。因此,细胞代谢的研究需要快速的 NMR 数据采集。在这里,我们已经应用带选择性优化的翻转角短瞬(SOFAST)-HMQC 技术对(15)N 标记的细胞进行了研究,首次表明可以在几秒钟内以高 S/N 比直接在活细胞中获得小分子代谢物的 2D(1)H-(15)N 相关光谱。(15)N 标记的 Thalassiosira rotula 硅藻细胞的 SOFAST-HMQC 光谱可以在 10-15 秒内获得,并且作为应用,我们已经检测到当硅藻暴露在 UV-B 辐射下时氨基酸含量的逐渐变化,而不需要进行长时间的分析程序来量化代谢变化。我们相信,快速采集技术可以很容易地扩展到其他细胞系统,在代谢组学和代谢组学这两个新兴领域有着广泛的应用前景,可以描绘出细胞内“瞬间”的代谢情况。

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